RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RBM39Q14498 530 aaKnown RBP10.68□□□□□ -0.7
DDX39A-202ENST00000324340 ACTBL2Q562R1 376 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 AWAT1Q58HT5 328 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 HEPN1Q6WQI6 88 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 BOLLQ8N9W6 283 aaKnown RBP10.68□□□□□ -0.7
DDX39A-202ENST00000324340 ZNF383Q8NA42 475 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 SUMF2Q8NBJ7 301 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 PBDC1Q9BVG4 233 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 SLC5A7Q9GZV3 580 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 KCNIP3Q9Y2W7 256 aa10.68□□□□□ -0.7
DDX39A-202ENST00000324340 STRAPQ9Y3F4 350 aaKnown RBP10.68□□□□□ -0.7
DDX39A-202ENST00000324340 ADGRG4Q8IZF6 3080 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 SLC33A1O00400 549 aaPredicted RBP10.67□□□□□ -0.7
DDX39A-202ENST00000324340 MED6O75586 246 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 HAND1O96004 215 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 SOD3P08294 240 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 PLA2G2AP14555 144 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 DTYMKP23919 212 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 PPP1R1AQ13522 171 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 KIAA0141Q14154 515 aaPredicted RBP10.67□□□□□ -0.7
DDX39A-202ENST00000324340 SRSF7Q16629 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDX39A-202ENST00000324340 TEX36Q5VZQ5 186 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
DDX39A-202ENST00000324340 HOGA1Q86XE5 327 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 GVQW1Q8N7I0 195 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 GALNT14Q96FL9 552 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 SEC22AQ96IW7 307 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 SIRT7Q9NRC8 400 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
DDX39A-202ENST00000324340 HELZ2Q9BYK8 2649 aaKnown RBP10.67□□□□□ -0.7
DDX39A-202ENST00000324340 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 A0A1B0GV90 55 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 A0A1W2PPH5 198 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 NAPSAO96009 420 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 CD80P33681 288 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 MDH2P40926 338 aaKnown RBP10.66□□□□□ -0.7
DDX39A-202ENST00000324340 HOXA4Q00056 320 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-202ENST00000324340 ATXN7L3Q14CW9 347 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-202ENST00000324340 TMEM268Q5VZI3 342 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 GAPTQ8N292 157 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 SLC6A7Q99884 636 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 RIMS4Q9H426 269 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-202ENST00000324340 TMEM231Q9H6L2 316 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 TAF9BQ9HBM6 251 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 FAM212BQ9NTI7 297 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-202ENST00000324340 WIPI2Q9Y4P8 454 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 DYSFO75923 2080 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 ZNF462Q96JM2 2506 aa10.66□□□□□ -0.7
DDX39A-202ENST00000324340 IGKV1D-17A0A075B6S4 117 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 TRBV6-6A0A0A6YYG2 114 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 C5orf51A6NDU8 294 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 TMEM178BH3BS89 294 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 FSTL3O95633 263 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 CLDN1O95832 211 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 CYB5R3P00387 301 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-202ENST00000324340 SEC11BP0C7V7 166 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 PSG2P11465 335 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 IRF2P14316 349 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 SNCAP37840 140 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 RBMXP38159 391 aaKnown RBP10.65□□□□□ -0.7
DDX39A-202ENST00000324340 LPAR6P43657 344 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 SULT1A1P50225 295 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 PAX5Q02548 391 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 TLE4Q04727 773 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 LRRC37A5PQ49AS3 106 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 TMEM128Q5BJH2 165 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 KRBOX4Q5JUW0 171 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 Q6ZPA2 131 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 Q6ZS49 121 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 TGIF2LYQ8IUE0 185 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 C1orf87Q8N0U7 546 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 CD177Q8N6Q3 437 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 OR4S1Q8NGB4 309 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 DYRK2Q92630 601 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 RDH5Q92781 318 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 C2orf50Q96LR7 162 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 HDHD3Q9BSH5 251 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-202ENST00000324340 TMEM106BQ9NUM4 274 aa10.65□□□□□ -0.7
DDX39A-202ENST00000324340 IGHV1-69-2A0A0G2JMI3 117 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 BTBD17A6NE02 478 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 OOEPA6NGQ2 149 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 J3QKU1 62 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 SIRPB1O00241 398 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 PSPNO60542 156 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 TSPAN15O95858 294 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 SNRNP70P08621 437 aaKnown RBP10.65□□□□□ -0.71
DDX39A-202ENST00000324340 PRDX2P32119 198 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 CEBPDP49716 269 aaPredicted RBP10.65□□□□□ -0.71
DDX39A-202ENST00000324340 MRPS11P82912 194 aaKnown RBP10.65□□□□□ -0.71
DDX39A-202ENST00000324340 IL15RAQ13261 267 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 STUMQ69YW2 141 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 UBAC2Q8NBM4 344 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 TERB2Q8NHR7 220 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 AKR1E2Q96JD6 320 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 RAB1BQ9H0U4 201 aa10.65□□□□□ -0.71
DDX39A-202ENST00000324340 SLC35B3Q9H1N7 401 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms