RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RHBDD1Q8TEB9 315 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM170AQ8WVE7 144 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 CNIH1O95406 144 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 NPSP0C0P6 89 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 C1orf194Q5T5A4 169 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OTPQ5XKR4 325 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ADTRPQ96IZ2 230 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR2V2Q96R30 315 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR6C1Q96RD1 312 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 MESP1Q9BRJ9 268 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 GLRX2Q9NS18 164 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 AURKAIP1Q9NWT8 199 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ANKRD10Q9NXR5 420 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ALG1L2C9J202 215 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 SLC25A17O43808 307 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF708P17019 499 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 MDKP21741 143 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 CBLN1P23435 193 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ANKRD37Q7Z713 158 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR10AG1Q8NH19 301 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 SLC37A2Q8TED4 501 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ELOVL5Q9NYP7 299 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 GPR132Q9UNW8 380 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ACACBO00763 2458 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 TNFSF15O95150 251 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OPRK1P41145 380 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 C2orf68Q2NKX9 166 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 GFI1BQ5VTD9 330 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 DOLPP1Q86YN1 238 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR2Y1Q8NGV0 311 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR10AC1Q8NH08 325 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM45BQ96B21 275 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 VSTM2LQ96N03 204 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 RNF133Q8WVZ7 376 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM70Q9BUB7 260 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 KLHDC2Q9Y2U9 406 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 NUDT3O95989 172 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 SRIP30626 198 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 CAPZBP47756 277 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 CCR5P51681 352 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 ATP5IP56385 69 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-201ENST00000322213 ROM1Q03395 351 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 FLRT3Q9NZU0 649 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 A0A0G2JK05 382 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 LIPFP07098 398 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 MC5RP33032 325 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 RUNX1Q01196 453 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 COL10A1Q03692 680 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 HSD17B10Q99714 261 aaKnown RBP6.15□□□□□ -1.42
SMC1A-201ENST00000322213 UBE2ZQ9H832 354 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-201ENST00000322213 OR51B4Q9Y5P0 310 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 RIPPLY3P57055 190 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF718Q3SXZ3 478 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 TEPPQ6URK8 271 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM56Q96MV1 263 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 HES4Q9HCC6 221 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 DUSP3P51452 185 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-201ENST00000322213 HERVK_113P61574 105 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 FAM117AQ9C073 453 aa6.15□□□□□ -1.42
SMC1A-201ENST00000322213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.43
SMC1A-201ENST00000322213 GCM2O75603 506 aaPredicted RBP6.15□□□□□ -1.43
SMC1A-201ENST00000322213 SCRG1O75711 98 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 FAM157CP0CG43 387 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 C1orf61Q13536 156 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF519Q8TB69 540 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 TMEM106BQ9NUM4 274 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 ACRP10323 421 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 ERGP11308 486 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 ACP1P24666 158 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 MPZP25189 248 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 PPP1CCP36873 323 aaKnown RBP6.15□□□□□ -1.43
SMC1A-201ENST00000322213 GNB1P62873 340 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF77Q15935 545 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 LINC01555Q8NAE3 123 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 SEMA5BQ9P283 1151 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 OOEPA6NGQ2 149 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 ZGLP1P0C6A0 271 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 EPHA8P29322 1005 aaPredicted RBP6.15□□□□□ -1.43
SMC1A-201ENST00000322213 GNG3P63215 75 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 SRSF9Q13242 221 aaKnown RBP eCLIP6.15□□□□□ -1.43
SMC1A-201ENST00000322213 DEFB119Q8N690 84 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 PERPQ96FX8 193 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.43
SMC1A-201ENST00000322213 PSG5Q15238 335 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 CNEP1R1Q8N9A8 125 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 KISS1RQ969F8 398 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 ZNF385AQ96PM9 386 aaKnown RBP6.14□□□□□ -1.43
SMC1A-201ENST00000322213 DIRC2Q96SL1 478 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 FAM90A26D6RGX4 464 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 S1PR2O95136 353 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 FCGR3AP08637 254 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 ICAM4Q14773 271 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 DEFB115Q30KQ5 88 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 FAM78AQ5JUQ0 283 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 C9orf135Q5VTT2 229 aa6.14□□□□□ -1.43
SMC1A-201ENST00000322213 VN1R2Q8NFZ6 395 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms