RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 GUSBP11Q6P575 273 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 CPEB3Q8NE35 698 aaKnown RBP15.18■□□□□ 0.02
PRKCB-202ENST00000321728 R3HDM4Q96D70 268 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 SGCZQ96LD1 299 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 ZNF488Q96MN9 340 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 MANBALQ9NQG1 85 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 PI4KAP42356 2102 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 YRDCQ86U90 279 aaKnown RBP15.18■□□□□ 0.02
PRKCB-202ENST00000321728 SPSB4Q96A44 273 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 NEIL1Q96FI4 390 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-202ENST00000321728 TBX15Q96SF7 602 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 RIMS4Q9H426 269 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-202ENST00000321728 TMEM9BQ9NQ34 198 aa15.18■□□□□ 0.02
PRKCB-202ENST00000321728 TRAV39A0A0B4J263 110 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 KIR2DL5BA0A0G2JN68 375 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 KIR2DL5BA0A0G2JPC4 375 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 GJE1A6NN92 205 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 C1QTNF9BB2RNN3 333 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 C3orf80F5H4A9 247 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 SYNGR1O43759 233 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 CCL2P13500 99 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 KIR2DL5AQ8N109 375 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 SDSLQ96GA7 329 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 C1QTNF5Q9BXJ0 243 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 PARD6GQ9BYG4 376 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-202ENST00000321728 PROK2Q9HC23 129 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 KIAA1549Q9HCM3 1950 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 A6NNC1 897 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 SFTPCP11686 197 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 TMEM208Q9BTX3 173 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 PPP1R14DQ9NXH3 145 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 GOLT1BQ9Y3E0 138 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 TIMM9Q9Y5J7 89 aa15.17■□□□□ 0.02
PRKCB-202ENST00000321728 MARCH11A6NNE9 402 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 CXCL13O43927 109 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 WDR1O75083 606 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 OR3A1P47881 315 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 RELQ04864 619 aaPredicted RBP15.16■□□□□ 0.02
PRKCB-202ENST00000321728 FFAR4Q5NUL3 377 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 DCAF10Q5QP82 559 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 UBALD1Q8TB05 177 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 NUPR1O60356 82 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 LILRA1O75019 489 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 HPRT1P00492 218 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 RPLP1P05386 114 aaKnown RBP15.16■□□□□ 0.02
PRKCB-202ENST00000321728 GCH1P30793 250 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 LCN2P80188 198 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 SLC23A3Q6PIS1 610 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 SAXO1Q8IYX7 474 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 GPR35Q9HC97 309 aa15.16■□□□□ 0.02
PRKCB-202ENST00000321728 CACNA1EQ15878 2313 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 ZNF716A6NP11 495 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 VENTXO95231 258 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 DEFA4P12838 97 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 CD33P20138 364 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 PPP1CBP62140 327 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 RAB30Q15771 203 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 HLA-BQ31612 363 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 CEACAM21Q3KPI0 293 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 ZNF585BQ52M93 769 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 MRPL21Q7Z2W9 205 aaKnown RBP15.15■□□□□ 0.02
PRKCB-202ENST00000321728 PRDM14Q9GZV8 571 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 CEP192Q8TEP8 1941 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 PRRC2CQ9Y520 2896 aaKnown RBP15.15■□□□□ 0.02
PRKCB-202ENST00000321728 C11orf94C9JXX5 98 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 IGLV2-14P01704 120 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 EGR1P18146 543 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 BMP5P22003 454 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 RPS16P62249 146 aaKnown RBP15.15■□□□□ 0.02
PRKCB-202ENST00000321728 PCOLCEQ15113 449 aa15.15■□□□□ 0.02
PRKCB-202ENST00000321728 REPIN1Q9BWE0 567 aaKnown RBP15.15■□□□□ 0.02
PRKCB-202ENST00000321728 LIN7CQ9NUP9 197 aaKnown RBP15.15■□□□□ 0.02
PRKCB-202ENST00000321728 LRP5LA4QPB2 252 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 DLEU1O43261 78 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 CBR3O75828 277 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 RPL15P61313 204 aaKnown RBP15.14■□□□□ 0.01
PRKCB-202ENST00000321728 C9orf135Q5VTT2 229 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 TRAV24A0A0B4J272 114 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 M0QZK8 103 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 CRYAAP02489 173 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 COX5AP20674 150 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 MPLP40238 635 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 SSR4P51571 173 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 TOMM20LQ6UXN7 152 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 TMEM14EPQ6UXP3 125 aa15.14■□□□□ 0.01
PRKCB-202ENST00000321728 NPSP0C0P6 89 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 NPPCP23582 126 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 FGFRL1Q8N441 504 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 ZCCHC14Q8WYQ9 949 aaKnown RBP15.13■□□□□ 0.01
PRKCB-202ENST00000321728 WDYHV1Q96HA8 205 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 STRADBQ9C0K7 418 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 A0A1W2PQM1 296 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 TOX3O15405 576 aaPredicted RBP15.13■□□□□ 0.01
PRKCB-202ENST00000321728 CCL7P80098 99 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 LINC01551Q86U37 167 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 ZNF709Q8N972 641 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 PARD6AQ9NPB6 346 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 OCIAD1Q9NX40 245 aa15.13■□□□□ 0.01
PRKCB-202ENST00000321728 PXMP4Q9Y6I8 212 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms