RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 KIAA2026Q5HYC2 2103 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 TRBV23-1A0A0A0MS06 115 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 A0A1W2PNU3 283 aaPredicted RBP7.33□□□□□ -1.24
CLK1-201ENST00000321356 CEBPZOSA8MTT3 80 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 C21orf140B9A014 251 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 PTBP3O95758 552 aaKnown RBP7.33□□□□□ -1.24
CLK1-201ENST00000321356 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 TRGC1P0CF51 173 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 ZNF883P0CG24 379 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
CLK1-201ENST00000321356 CEACAM6P40199 344 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 CD81P60033 236 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 SPANXN5Q5MJ07 72 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 GFI1BQ5VTD9 330 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 FBXW9Q5XUX1 488 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 CDPF1Q6NVV7 123 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 CYP2G1PQ6ZSU1 146 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 PRR18Q8N4B5 295 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 LINC00469Q8N7U9 141 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 ZBTB34Q8NCN2 500 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 MDS2Q8NDY4 140 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 UBALD1Q8TB05 177 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 SSX3Q99909 188 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 PYGO2Q9BRQ0 406 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 GPR61Q9BZJ8 451 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 PRDM13Q9H4Q3 707 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 PLA2G3Q9NZ20 509 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 FOXJ2Q9P0K8 574 aa7.33□□□□□ -1.24
CLK1-201ENST00000321356 UBE2L5PA0A1B0GUS4 154 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 TMEM250H0YL14 139 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 SH2D1BO14796 132 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 SMPD2O60906 423 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 ZNF737O75373 536 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 SP1P08047 785 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 JMJD7P0C870 316 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 HIST1H1BP16401 226 aaKnown RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 MEOX1P50221 254 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 MEF2BQ02080 365 aaPredicted RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 PLGLB1Q02325 96 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 MSMO1Q15800 293 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 ATP6V1FQ16864 119 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 TBC1D28Q2M2D7 210 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 ZNF766Q5HY98 468 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 MYPOPQ86VE0 399 aaPredicted RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 ZNF645Q8N7E2 425 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 C5orf30Q96GV9 206 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 SMOC1Q9H4F8 434 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 C12orf49Q9H741 205 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 HES4Q9HCC6 221 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 NAT8Q9UHE5 227 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 RBM7Q9Y580 266 aaKnown RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 MED13Q9UHV7 2174 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 USF3Q68DE3 2245 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 OR5H1A6NKK0 313 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 PMS2P5A8MQ11 134 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 KBTBD11O94819 623 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 NXPH2O95156 264 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 PFN1P07737 140 aaKnown RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 ELLP55199 621 aaPredicted RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 PPP1CBP62140 327 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 GABRA6Q16445 453 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 ACSM6Q6P461 480 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 LINC00696Q6ZRV3 163 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 ZNF383Q8NA42 475 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 LHX4Q969G2 390 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 SMIM7Q9BQ49 75 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 MRPL37Q9BZE1 423 aaKnown RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 SLC39A9Q9NUM3 307 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 KLF13Q9Y2Y9 288 aaPredicted RBP7.32□□□□□ -1.24
CLK1-201ENST00000321356 R4GN57 208 aa7.32□□□□□ -1.24
CLK1-201ENST00000321356 ZDBF2Q9HCK1 2354 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 CTXND1A0A1B0GTU2 59 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 TMEM30CPA0ZSE6 113 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 TMEM210A6NLX4 147 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 LRRC30A6NM36 301 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 IQCF6A8MYZ5 107 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 C12orf77C9JDV5 145 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 CDIPTO14735 213 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 RAMP3O60896 148 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 CLDN1O95832 211 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 CELA3BP08861 270 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 RAC2P15153 192 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 BRWD1-AS2P59051 145 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 RPL30P62888 115 aaKnown RBP7.31□□□□□ -1.24
CLK1-201ENST00000321356 TMEM241Q24JQ0 296 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 VWC2Q2TAL6 325 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 ALKBH6Q3KRA9 238 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 NCR3LG1Q68D85 454 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 OR10A7Q8NGE5 316 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 OR1L1Q8NH94 360 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 WDYHV1Q96HA8 205 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 TMEM147Q9BVK8 224 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 OR2J1Q9GZK6 312 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 SRD5A3Q9H8P0 318 aa7.31□□□□□ -1.24
CLK1-201ENST00000321356 PITPNC1Q9UKF7 332 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms