RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZNF251Q9BRH9 671 aa14.16□□□□□ -0.14
CLIP4-201ENST00000320081 SRD5A3Q9H8P0 318 aa14.16□□□□□ -0.14
CLIP4-201ENST00000320081 LPAR2Q9HBW0 351 aa14.16□□□□□ -0.14
CLIP4-201ENST00000320081 MYO9AB2RTY4 2548 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 SRSF3P84103 164 aaKnown RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 PRB3Q04118 309 aaPredicted RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 TMEM105Q8N8V8 129 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 FGFBP3Q8TAT2 258 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 TMEM222Q9H0R3 208 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 PPIHO43447 177 aaKnown RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 CD74P04233 296 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 UMODP07911 640 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 HLA-GP17693 338 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 SULT1A2P50226 295 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 PSG5Q15238 335 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 FNDC7Q5VTL7 733 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 VOPP1Q96AW1 172 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 ZNF581Q9P0T4 197 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 CRYM-AS1A6NIL9 109 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 FCN1O00602 326 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 NPIPB7O75200 414 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 LY6G6FQ5SQ64 297 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 MRPL54Q6P161 138 aaKnown RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 TMEM108Q6UXF1 575 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 SIGLECL1Q8N7X8 197 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 CPEB3Q8NE35 698 aaKnown RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 MRPL30Q8TCC3 161 aaKnown RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 TMEM147Q9BVK8 224 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 IGKV3-7A0A075B6H7 116 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 SLC31A2O15432 143 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 MELTFP08582 738 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 SEC11BP0C7V7 166 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 LRRC10Q5BKY1 277 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 BHLHA15Q7RTS1 189 aaPredicted RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 FGFRL1Q8N441 504 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 NFAM1Q8NET5 270 aaPredicted RBP14.15□□□□□ -0.14
CLIP4-201ENST00000320081 C10orf35Q96D05 121 aa14.15□□□□□ -0.14
CLIP4-201ENST00000320081 RANBP2P49792 3224 aaKnown RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 H0YIZ8 118 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 AP4M1O00189 453 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 HSBP1O75506 76 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 PGLYRP1O75594 196 aaPredicted RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 HRASP01112 189 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 MDH2P40926 338 aaKnown RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 WNT5AP41221 380 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 FAM3BP58499 235 aaPredicted RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 FAM209BQ5JX69 171 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 OR4C12Q96R67 309 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 SLC2A8Q9NY64 477 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 MKI67P46013 3256 aaKnown RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 SETD2Q9BYW2 2564 aaPredicted RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 C21orf140B9A014 251 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 TRGC2P03986 189 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 CSN3P07498 182 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 KHDC1LQ5JSQ8 128 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 FAM214BQ7L5A3 538 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 ZNRF1Q8ND25 227 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 NEIL1Q96FI4 390 aaPredicted RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 RHOVQ96L33 236 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 HEXA-AS1Q9H8Q6 139 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 BARX1Q9HBU1 254 aaPredicted RBP14.14□□□□□ -0.15
CLIP4-201ENST00000320081 PARP11Q9NR21 331 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 MALRD1Q5VYJ5 2156 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 TRAV38-1A0A0B4J264 116 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 CHEK1O14757 476 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 CELA3BP08861 270 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 OR2V2Q96R30 315 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 Q9N2K0 584 aa14.14□□□□□ -0.15
CLIP4-201ENST00000320081 PRDX2P32119 198 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 OR1L4Q8NGR5 311 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 SAP30LQ9HAJ7 183 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 ABCA2Q9BZC7 2435 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 LAMA2P24043 3122 aaKnown RBP14.13□□□□□ -0.15
CLIP4-201ENST00000320081 TIMD4Q96H15 378 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 TLN1Q9Y490 2541 aaKnown RBP14.13□□□□□ -0.15
CLIP4-201ENST00000320081 ATXN7O15265 892 aaPredicted RBP14.13□□□□□ -0.15
CLIP4-201ENST00000320081 B2MP61769 119 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 FDCSPQ8NFU4 85 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 FAM216AQ8WUB2 273 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 DEPPQ9NTK1 212 aa14.13□□□□□ -0.15
CLIP4-201ENST00000320081 TNXAQ16473 311 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 ITLN1Q8WWA0 313 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 RPEQ96AT9 228 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 MOB3AQ96BX8 217 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 TRBV23-1A0A0A0MS06 115 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 OOEPA6NGQ2 149 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 DBX1A6NMT0 343 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 OR4A4PQ8NGN8 299 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 RTBDNQ9BSG5 229 aaPredicted RBP14.12□□□□□ -0.15
CLIP4-201ENST00000320081 RFNGQ9Y644 331 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 ZG16O60844 167 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 FAM157CP0CG43 387 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 UBE2L3P68036 154 aaKnown RBP14.12□□□□□ -0.15
CLIP4-201ENST00000320081 DHRS7BQ6IAN0 325 aaPredicted RBP14.12□□□□□ -0.15
CLIP4-201ENST00000320081 TRAT1Q6PIZ9 186 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 MRPL13Q9BYD1 178 aaKnown RBP14.12□□□□□ -0.15
CLIP4-201ENST00000320081 KIAA1456Q9P272 454 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 ARL2-SNX15V9GYD0 113 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 B4E171 279 aa14.12□□□□□ -0.15
CLIP4-201ENST00000320081 CRYABP02511 175 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms