RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 DEGS1O15121 323 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 TMEM50AO95807 157 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 IGKV3-15P01624 115 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 COX5BP10606 129 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 S100PP25815 95 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 FGF12P61328 243 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 TMEM267Q0VDI3 215 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-202ENST00000315962 GAMTQ14353 236 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 HERPUD1Q15011 391 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF880Q6PDB4 577 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 BEND4Q6ZU67 534 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 TUBD1Q9UJT1 453 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 KCNIP3Q9Y2W7 256 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV3OR15-7A0A075B7D8 119 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 IGHV2OR16-5A0A0B4J2B6 119 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 A0A0G2JNJ9 132 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 ST8SIA3O43173 380 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 ADAM20O43506 726 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 PSPNO60542 156 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 TUBG1P23258 451 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 DYNLT3P51808 116 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 SURF2Q15527 256 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-202ENST00000315962 MPV17LQ2QL34 196 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 WDR25Q64LD2 544 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-202ENST00000315962 LCN15Q6UWW0 184 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 HEPN1Q6WQI6 88 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 ASCL4Q6XD76 172 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF573Q86YE8 665 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 RFESDQ8TAC1 157 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 SNX22Q96L94 193 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 NECAP2Q9NVZ3 263 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 GNG13Q9P2W3 67 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 Q9UFV3 132 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 METRNQ9UJH8 293 aa6.42□□□□□ -1.38
TRIM55-202ENST00000315962 VPS13CQ709C8 3753 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 CELSR1Q9NYQ6 3014 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 IGKV1D-13A0A0B4J2D9 117 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 IGKV1-6A0A0C4DH72 117 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 PROB1E7EW31 1015 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 GPR137BO60478 399 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 OR2H2O95918 312 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 GAPDHP04406 335 aaKnown RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 IGKV1-13P0DP09 117 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 S100A2P29034 98 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 GCH1P30793 250 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 GPX4P36969 197 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 LINC00205P59089 165 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 AESQ08117 197 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 FAM189A2Q15884 450 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 INO80CQ6PI98 192 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 LIAT1Q6ZQX7 453 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 WFDC8Q8IUA0 241 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 DMRTC2Q8IXT2 367 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 DEFB108BQ8NET1 73 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 DCTN5Q9BTE1 182 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 RSG1Q9BU20 258 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 VSIRQ9H7M9 311 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 OR1A1Q9P1Q5 309 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 UBE2J1Q9Y385 318 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 MBD3L4A6NDZ8 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 MBD3L3A6NE82 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 MBD3L5A6NJ08 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 DEFB108AA8MXU0 73 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 K7N7A8 449 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 IFNA17P01571 189 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 DEFA4P12838 97 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 COX5AP20674 150 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HERV-K104P61576 105 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 RAB11AP62491 216 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 EDDM3AQ14507 147 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 RNF212Q495C1 297 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 C1orf185Q5T7R7 199 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 SLC25A24Q6NUK1 477 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 SPSB3Q6PJ21 355 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 ZNF429Q86V71 674 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 OR2C3Q8N628 320 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 OR5T1Q8NG75 326 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 OR51H1Q8NH63 302 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 MBD3L2Q8NHZ7 208 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 MSI2Q96DH6 328 aaKnown RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 MUCL1Q96DR8 90 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 RTL8AQ9BWD3 113 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 TUBA4BQ9H853 241 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 RNF150Q9ULK6 438 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 FLNCQ14315 2725 aa6.41□□□□□ -1.38
TRIM55-202ENST00000315962 ANKHD1Q8IWZ3 2542 aaKnown RBP6.41□□□□□ -1.38
TRIM55-202ENST00000315962 C1QTNF9BB2RNN3 333 aa6.4□□□□□ -1.38
TRIM55-202ENST00000315962 WRBO00258 174 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms