RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 C8orf82Q6P1X6 216 aaPredicted RBP11.59□□□□□ -0.55
RFFL-201ENST00000315249 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 FAM122BQ7Z309 247 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 GSX2Q9BZM3 304 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 S100A8P05109 93 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
RFFL-201ENST00000315249 hCG_38984A0A1B0GV85 526 aa11.58□□□□□ -0.55
RFFL-201ENST00000315249 NPBWR2P48146 333 aa11.58□□□□□ -0.55
RFFL-201ENST00000315249 LILRB4Q8NHJ6 448 aa11.58□□□□□ -0.55
RFFL-201ENST00000315249 TMEM54Q969K7 222 aa11.58□□□□□ -0.55
RFFL-201ENST00000315249 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.55
RFFL-201ENST00000315249 TECRQ9NZ01 308 aaKnown RBP11.58□□□□□ -0.55
RFFL-201ENST00000315249 MGPP08493 103 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
RFFL-201ENST00000315249 GALR1P47211 349 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 ZNF273Q14593 569 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 CEBPEQ15744 281 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 DLL3Q9NYJ7 618 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 MMP24Q9Y5R2 645 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 DHRS7CA6NNS2 312 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 MPC2O95563 127 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 VSIG10L2P0DP72 767 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 KLF9Q13886 244 aaPredicted RBP11.58□□□□□ -0.56
RFFL-201ENST00000315249 C5orf17Q8NAS9 161 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 MEGF10Q96KG7 1140 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 USF3Q68DE3 2245 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 CELA3BP08861 270 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 ZNF708P17019 499 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 RCC1P18754 421 aaPredicted RBP11.58□□□□□ -0.56
RFFL-201ENST00000315249 PTPRDP23468 1912 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 IGKV1D-42A0A075B6H8 117 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 GLIPR1P48060 266 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 LAMTOR1Q6IAA8 161 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 HPRT1P00492 218 aa11.58□□□□□ -0.56
RFFL-201ENST00000315249 IGKV3D-15A0A087WSY6 115 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 TXNDC12O95881 172 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 AMTP48728 403 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 ZNF645Q8N7E2 425 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 SIGLECL1Q8N7X8 197 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 HLA-GP17693 338 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 TMEM50BP56557 158 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 PRB3Q04118 309 aaPredicted RBP11.57□□□□□ -0.56
RFFL-201ENST00000315249 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
RFFL-201ENST00000315249 GP6Q9HCN6 339 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 SPRR3Q9UBC9 169 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 FBXL17Q9UF56 701 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 CACNA1HO95180 2353 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 CST4P01036 141 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 ASB13Q8WXK3 278 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 SS18L1O75177 396 aaPredicted RBP11.57□□□□□ -0.56
RFFL-201ENST00000315249 CRYBA2P53672 197 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 ZCCHC24Q8N2G6 241 aaKnown RBP11.57□□□□□ -0.56
RFFL-201ENST00000315249 RNF2Q99496 336 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 CEACAM18A8MTB9 384 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 FAM209AQ5JX71 171 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 LINC00470Q9BZP3 86 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 IGHV2OR16-5A0A0B4J2B6 119 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 ZDHHC11Q9H8X9 412 aa11.57□□□□□ -0.56
RFFL-201ENST00000315249 IGKV3D-11A0A0A0MRZ8 115 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 RPL8P62917 257 aaKnown RBP11.56□□□□□ -0.56
RFFL-201ENST00000315249 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 CALHM1Q8IU99 346 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.56□□□□□ -0.56
RFFL-201ENST00000315249 E9PLN8 166 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 KCNAB3O43448 404 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 LHX2P50458 406 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 ATP5G2Q06055 141 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 UNQ9370/PRO34162Q6UXP9 181 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 MRPL24Q96A35 216 aaKnown RBP11.56□□□□□ -0.56
RFFL-201ENST00000315249 GPHA2Q96T91 129 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 VKORC1Q9BQB6 163 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 MESP1Q9BRJ9 268 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 CAMPP49913 170 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 PPOXP50336 477 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 EGR4Q05215 589 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 TUSC1Q2TAM9 212 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 ZNF705AQ6ZN79 300 aaPredicted RBP11.56□□□□□ -0.56
RFFL-201ENST00000315249 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
RFFL-201ENST00000315249 HIGD1AQ9Y241 93 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 IGHV3-35A0A0C4DH35 117 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 INHBBP09529 407 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 COX5BP10606 129 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 GZMKP49863 264 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 TMEM33P57088 247 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 RPEL1Q2QD12 228 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 SOSTQ9BQB4 213 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 TMEM167BQ9NRX6 74 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 PLXND1Q9Y4D7 1925 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 A0A1W2PS18 150 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 NEURL1O76050 574 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 FOXB2Q5VYV0 432 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 RHOFQ9HBH0 211 aa11.56□□□□□ -0.56
RFFL-201ENST00000315249 OR9G1Q8NH87 305 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 IL22RA2Q969J5 263 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 GPX7Q96SL4 187 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms