RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 RARRES2Q99969 163 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 PILRAQ9UKJ1 303 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 MRPS18BQ9Y676 258 aaKnown RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 A0A1B0GU03 582 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 NDUFB4O95168 129 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 NPBWR2P48146 333 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 ZFP36L1Q07352 338 aaKnown RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 ZNF506Q5JVG8 444 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 OR4X1Q8NH49 305 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 GPA33Q99795 319 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 PLAC1Q9HBJ0 212 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 MT-ND6P03923 174 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 PRICKLE4Q2TBC4 344 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 PABPC1L2AQ5JQF8 200 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 CALHM1Q8IU99 346 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 ZDHHC16Q969W1 377 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 ALX4Q9H161 411 aaPredicted RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 SAP30LQ9HAJ7 183 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 F11RQ9Y624 299 aaKnown RBP7.12□□□□□ -1.27
VPS41-202ENST00000310301 C1QL1O75973 258 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 COX6CP09669 75 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 CCL2P13500 99 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 GBGT1Q8N5D6 347 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 MARVELD3Q96A59 401 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 OR2J1Q9GZK6 312 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 SLC26A1Q9H2B4 701 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 CACNA1HO95180 2353 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 SHROOM3Q8TF72 1996 aa7.12□□□□□ -1.27
VPS41-202ENST00000310301 CNTRLQ7Z7A1 2325 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 IGHV1-45A0A0A0MS14 117 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 LEPROTL1O95214 131 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 PSG2P11465 335 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TNFRSF1AP19438 455 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 BMI1P35226 326 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TNXAQ16473 311 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TBR1Q16650 682 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 MESTQ5EB52 335 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 NHLRC3Q5JS37 347 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 SLC25A30Q5SVS4 291 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 RPEQ96AT9 228 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 DNPH1O43598 174 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 PRNTQ86SH4 94 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 OPN3Q9H1Y3 402 aaPredicted RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 WIPI2Q9Y4P8 454 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 LMX1BO60663 402 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 GAPDHP04406 335 aaKnown RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 BTF3P20290 206 aaKnown RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 ZIC1Q15915 447 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 OR11H4Q8NGC9 324 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 ASB10Q8WXI3 467 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 PARLQ9H300 379 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 MUC6Q6W4X9 2439 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 RLFQ13129 1914 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 NPIPB9F8W1W9 429 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 FOLR2P14207 255 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TWIST1Q15672 202 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TEPPQ6URK8 271 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 WDR31Q8NA23 367 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 PTPMT1Q8WUK0 201 aaPredicted RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 SNRNP40Q96DI7 357 aaKnown RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 UBTD1Q9HAC8 227 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 CLN8Q9UBY8 286 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 IL19Q9UHD0 177 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 COL4A6Q14031 1691 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 KBTBD11O94819 623 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 TSPAN13O95857 204 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 PMELP40967 661 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 C21orf58P58505 322 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 YBX1P67809 324 aaKnown RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 LRRC29Q8WV35 223 aa7.11□□□□□ -1.27
VPS41-202ENST00000310301 MYOZ1Q9NP98 299 aaPredicted RBP7.11□□□□□ -1.27
VPS41-202ENST00000310301 TTC28Q96AY4 2481 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 PATE4P0C8F1 98 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 VSIG8P0DPA2 414 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 LY6DQ14210 128 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 IBA57Q5T440 356 aaKnown RBP7.1□□□□□ -1.27
VPS41-202ENST00000310301 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 GRAMD2BQ96HH9 432 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 TREM2Q9NZC2 230 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 OR4C45A6NMZ5 311 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 AMY1AP04745 511 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 HKR1P10072 659 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 SERF2P84101 59 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 PEAR1Q5VY43 1037 aaPredicted RBP7.1□□□□□ -1.27
VPS41-202ENST00000310301 SLC36A1Q7Z2H8 476 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 ZNF519Q8TB69 540 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 PEF1Q9UBV8 284 aaKnown RBP7.1□□□□□ -1.27
VPS41-202ENST00000310301 ST6GALNAC2Q9UJ37 374 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 HS3ST3B1Q9Y662 390 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 OOEPA6NGQ2 149 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 SOSTQ9BQB4 213 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
VPS41-202ENST00000310301 MAGEA5P43359 124 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 KIR2DL2P43627 348 aaPredicted RBP7.1□□□□□ -1.27
VPS41-202ENST00000310301 PIGYQ3MUY2 71 aa7.1□□□□□ -1.27
VPS41-202ENST00000310301 HOGA1Q86XE5 327 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms