RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SAA2-SAA4A0A096LPE2 208 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 SAA2P0DJI9 122 aaPredicted RBP17.99■□□□□ 0.47
HOXD4-201ENST00000306324 NFYAP23511 347 aaPredicted RBP17.99■□□□□ 0.47
HOXD4-201ENST00000306324 CD24P25063 80 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 OR3A3P47888 321 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 ZNF137PP52743 207 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 ZNF816Q0VGE8 651 aaPredicted RBP17.99■□□□□ 0.47
HOXD4-201ENST00000306324 FAM131AQ6UXB0 335 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 TGIF2LXQ8IUE1 241 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 OR8H3Q8N146 312 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 PIFOQ8TCI5 191 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 AGMATQ9BSE5 352 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 PIPOXQ9P0Z9 390 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 KLK11Q9UBX7 282 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 VPREB3Q9UKI3 123 aa17.99■□□□□ 0.47
HOXD4-201ENST00000306324 A0A1W2PPI3 338 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 J3QRK9 145 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 TIMM23O14925 209 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 RAB29O14966 203 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 RNASE1P07998 156 aaKnown RBP17.98■□□□□ 0.47
HOXD4-201ENST00000306324 OR8U9P0C7N5 309 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 NAT1P18440 290 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 HLA-DMAP28067 261 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 RCVRNP35243 200 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 MRPS10P82664 201 aaKnown RBP17.98■□□□□ 0.47
HOXD4-201ENST00000306324 DGCR2P98153 550 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 CDK10Q15131 360 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 MOB3BQ86TA1 216 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 OR8U1Q8NH10 309 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 OR56B4Q8NH76 319 aa17.98■□□□□ 0.47
HOXD4-201ENST00000306324 IGHV1-3A0A0C4DH29 117 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 GABARAPH6UMI1 98 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 RBBP9O75884 186 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 PMP2P02689 132 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 OR5H8P0DN80 308 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 DYNLT3P51808 116 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 TAS2R46P59540 309 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 CNPY1Q3B7I2 92 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 LYSMD2Q8IV50 215 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 DRAM1Q8N682 238 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 OR6Q1Q8NGQ2 317 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 OR5H2Q8NGV7 314 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 OR2D2Q9H210 308 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 EHFQ9NZC4 300 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 ZNF221Q9UK13 617 aa17.97■□□□□ 0.47
HOXD4-201ENST00000306324 TXNL1O43396 289 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 LANCL1O43813 399 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 GPR12P47775 334 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 RFX2P48378 723 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 ACTBP60709 375 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 ACTG1P63261 375 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 RPL39P5Q59GN2 51 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 C16orf87Q6PH81 154 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 S1PR3Q99500 378 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 GHITMQ9H3K2 345 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 MTFP1Q9UDX5 166 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 TCF19Q9Y242 345 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 OR2W1Q9Y3N9 320 aa17.96■□□□□ 0.47
HOXD4-201ENST00000306324 CTDSPLO15194 276 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 FCGR2CP31995 323 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 HRH1P35367 487 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 ZNF833PQ6ZTB9 187 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 SMIM4Q8WVI0 70 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 CAPSLQ8WWF8 208 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 SOSTQ9BQB4 213 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 FBN1P35555 2871 aaKnown RBP17.95■□□□□ 0.46
HOXD4-201ENST00000306324 IGHV3-72A0A0B4J1Y9 119 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 FAM181BA6NEQ2 426 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 GPR137BO60478 399 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 SPANXN2Q5MJ10 180 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 CCDC190Q86UF4 302 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 TMEM219Q86XT9 240 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 CFHR4Q92496 578 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 ZNF251Q9BRH9 671 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 MRPL20Q9BYC9 149 aaKnown RBP17.95■□□□□ 0.46
HOXD4-201ENST00000306324 PITPNC1Q9UKF7 332 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 V9GYH0 126 aa17.95■□□□□ 0.46
HOXD4-201ENST00000306324 LUMP51884 338 aaPredicted RBP17.94■□□□□ 0.46
HOXD4-201ENST00000306324 FAM71F2Q6NXP2 309 aa17.94■□□□□ 0.46
HOXD4-201ENST00000306324 OVCH2Q7RTZ1 564 aa17.94■□□□□ 0.46
HOXD4-201ENST00000306324 FAM216AQ8WUB2 273 aa17.94■□□□□ 0.46
HOXD4-201ENST00000306324 ZFAND2BQ8WV99 257 aa17.94■□□□□ 0.46
HOXD4-201ENST00000306324 ZNF736B4DX44 427 aaPredicted RBP17.93■□□□□ 0.46
HOXD4-201ENST00000306324 TUSC2O75896 110 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 SNRNP70P08621 437 aaKnown RBP17.93■□□□□ 0.46
HOXD4-201ENST00000306324 FAM106CPP0CH98 169 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 AADACP22760 399 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 DYRK1AQ13627 763 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 HES1Q14469 280 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 KRTAP24-1Q3LI83 254 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 PYDC2Q56P42 97 aa17.93■□□□□ 0.46
HOXD4-201ENST00000306324 CCBE1Q6UXH8 406 aaPredicted RBP17.93■□□□□ 0.46
HOXD4-201ENST00000306324 IGKV1D-13A0A0B4J2D9 117 aa17.92■□□□□ 0.46
HOXD4-201ENST00000306324 A6NDX4 124 aa17.92■□□□□ 0.46
HOXD4-201ENST00000306324 IGKV1D-33P01593 117 aa17.92■□□□□ 0.46
HOXD4-201ENST00000306324 IGKV1-33P01594 117 aa17.92■□□□□ 0.46
HOXD4-201ENST00000306324 CRYBA1P05813 215 aa17.92■□□□□ 0.46
HOXD4-201ENST00000306324 IGKV1-13P0DP09 117 aa17.92■□□□□ 0.46
HOXD4-201ENST00000306324 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.92■□□□□ 0.46
HOXD4-201ENST00000306324 NABP2Q9BQ15 211 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms