RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PAQR4Q8N4S7 273 aaPredicted RBP7.83□□□□□ -1.16
PTPRE-202ENST00000306042 FAM169BQ8N8A8 192 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 TIMM8BQ9Y5J9 83 aaPredicted RBP7.83□□□□□ -1.16
PTPRE-202ENST00000306042 ARL3P36405 182 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 PPT1P50897 306 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 OPCMLQ14982 345 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 PEA15Q15121 130 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 WDR82Q6UXN9 313 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 KDF1Q8NAX2 398 aaPredicted RBP7.83□□□□□ -1.16
PTPRE-202ENST00000306042 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 NEUROG1Q92886 237 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 LURAP1Q96LR2 239 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 MTCH1Q9NZJ7 389 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 KCNK7Q9Y2U2 307 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 PTPRSQ13332 1948 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 UBE2L5PA0A1B0GUS4 154 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 CEACAM18A8MTB9 384 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 BOLA2-SMG1P6H3BVE0 249 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 HPXP02790 462 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 CD99P14209 185 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 S100A1P23297 94 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 S100A11P31949 105 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 PSMB3P49720 205 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 OR2F1Q13607 317 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF362Q5T0B9 420 aaPredicted RBP7.83□□□□□ -1.16
PTPRE-202ENST00000306042 BPIFCQ8NFQ6 507 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 FBLIM1Q8WUP2 373 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 YIPF5Q969M3 257 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 RHOVQ96L33 236 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 P2RX4Q99571 388 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 ACTR3CQ9C0K3 210 aaPredicted RBP7.83□□□□□ -1.16
PTPRE-202ENST00000306042 LINC00312Q9Y6C7 94 aa7.83□□□□□ -1.16
PTPRE-202ENST00000306042 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPRE-202ENST00000306042 A0A1B0GTI1 187 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 C9orf170A2RU37 121 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 GSTZ1O43708 216 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 SLC25A17O43808 307 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 PGA5P0DJD9 388 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 RTN4RL2Q86UN3 420 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 WDR31Q8NA23 367 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 SLC25A28Q96A46 364 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 PRORYQ9H606 182 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 UTRNP46939 3433 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 PQLC2LA1A4F0 135 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 CHST1O43916 411 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 DUS4LO95620 317 aaKnown RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF14P17017 642 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 CHATP28329 748 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 LOXL3P58215 753 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ADIPOQQ15848 244 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF767PQ75MW2 155 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF645Q8N7E2 425 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 OR4F17Q8NGA8 305 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 OR4F5Q8NH21 305 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 OR4F4Q96R69 305 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF649Q9BS31 505 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 OR51I2Q9H344 312 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 NPAP1Q9NZP6 1156 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 CDC42EP3Q9UKI2 254 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 SPG11Q96JI7 2443 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 PLXND1Q9Y4D7 1925 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 E7EQL1 145 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 SNRNP200O75643 2136 aaKnown RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 LYZP61626 148 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 LIAT1Q6ZQX7 453 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 SLC51BQ86UW2 128 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ZNF835Q9Y2P0 537 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 POMT1Q9Y6A1 747 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 M0QZK8 103 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ETV2O00321 342 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 HOXD11P31277 338 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 SLC38A11Q08AI6 406 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 CXorf66Q5JRM2 361 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 TMEM182Q6ZP80 229 aaPredicted RBP7.82□□□□□ -1.16
PTPRE-202ENST00000306042 DNM1P46Q6ZS02 220 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 ACOT7LQ6ZUV0 252 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 DTD1Q8TEA8 209 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 Q8WTZ3 238 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 TMEM208Q9BTX3 173 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 OR51B2Q9Y5P1 312 aa7.82□□□□□ -1.16
PTPRE-202ENST00000306042 WNK2Q9Y3S1 2297 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 MOGAT2Q3SYC2 334 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 ALKAL2Q6UX46 152 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 FAM219AQ8IW50 185 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 RELL2Q8NC24 303 aaPredicted RBP7.81□□□□□ -1.16
PTPRE-202ENST00000306042 OR1L6Q8NGR2 347 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 TRAV20A0A0B4J274 112 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 SYNGR2O43760 224 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 PLAUP00749 431 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 IGKV3-15P01624 115 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 HTR2BP41595 481 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 RPL8P62917 257 aaKnown RBP7.81□□□□□ -1.16
PTPRE-202ENST00000306042 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 RNF141Q8WVD5 230 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 FER1L5A0AVI2 2057 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 PTPN13Q12923 2485 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 GTF3C1Q12789 2109 aa7.81□□□□□ -1.16
PTPRE-202ENST00000306042 IGKV3-7A0A075B6H7 116 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms