RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 LYPD8Q6UX82 237 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 OR8I2Q8N0Y5 310 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 OR10AC1Q8NH08 325 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 OR10AG1Q8NH19 301 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 MARS2Q96GW9 593 aaKnown RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 PXMP4Q9Y6I8 212 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 NPIPB13A6NJU9 1138 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 NPIPB4C9JG80 1138 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 MPZL1O95297 269 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 TMIGD3P0DMS9 266 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 EPHA8P29322 1005 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 CBLN3Q6UW01 205 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 REC114Q7Z4M0 266 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 AMER3Q8N944 861 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 ERVFRD-1P60508 538 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 C1orf100Q5SVJ3 147 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 WIPI2Q9Y4P8 454 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 DIDO1Q9BTC0 2240 aaKnown RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM189A5PLL7 270 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 C2CD4DB7Z1M9 353 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM250H0YL14 139 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 J3QR06 171 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 PRKNO60260 465 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 GUCA2BQ16661 112 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 WDR31Q8NA23 367 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 PARD6GQ9BYG4 376 aaPredicted RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 H3BMH7 237 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 CD3EP07766 207 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 NXPH1P58417 271 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 FGF12P61328 243 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 PRSS41Q7RTY9 318 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 LDLRAD3Q86YD5 345 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 RFESDQ8TAC1 157 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 QTRT1Q9BXR0 403 aaKnown RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 HEXA-AS1Q9H8Q6 139 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 MRPS18BQ9Y676 258 aaKnown RBP6.65□□□□□ -1.34
SF3B3-201ENST00000302516 SIPA1L1O43166 1804 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 TRGV8A0A0C4DH27 118 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 CLDN14O95500 239 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 HLA-DRB1P01911 266 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 NMUP48645 174 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 RAB9AP51151 201 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 LCN2P80188 198 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 KCNK7Q9Y2U2 307 aa6.65□□□□□ -1.34
SF3B3-201ENST00000302516 A0A087WWC5 75 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 CD74P04233 296 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 WNT16Q9UBV4 365 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 PEF1Q9UBV8 284 aaKnown RBP6.65□□□□□ -1.35
SF3B3-201ENST00000302516 EIF3GO75821 320 aaKnown RBP eCLIP6.65□□□□□ -1.35
SF3B3-201ENST00000302516 ERGP11308 486 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 TNFSF10P50591 281 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 ZXDAP98168 799 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 DCAF12L2Q5VW00 463 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 MIEN1Q9BRT3 115 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 MAP1LC3AQ9H492 121 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 CARHSP1Q9Y2V2 147 aaKnown RBP6.65□□□□□ -1.35
SF3B3-201ENST00000302516 LILRA6Q6PI73 481 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 STPG3Q8N7X2 389 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 OR4C12Q96R67 309 aa6.65□□□□□ -1.35
SF3B3-201ENST00000302516 A0A1B0GW15 77 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 FBLL1A6NHQ2 334 aaKnown RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 NPIPB9F8W1W9 429 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 CCL17Q92583 94 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 DXOO77932 396 aaKnown RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 KBTBD11O94819 623 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 S1PR2O95136 353 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 HKR1P10072 659 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 HOXB1P14653 301 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 MRPL18Q9H0U6 180 aaKnown RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 DOCK9Q9BZ29 2069 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 C3orf80F5H4A9 247 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 LYZL6O75951 148 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 TRGC2P03986 189 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 PLXNA3P51805 1871 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 C1orf53Q5VUE5 145 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 LRRC75AQ8NAA5 344 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 METTL26Q96S19 204 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 PPP1R17O96001 155 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 HOXD4P09016 255 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 HOXB3P14651 431 aaPredicted RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 MC5RP33032 325 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 DMRTC1Q5HYR2 192 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 FBXW9Q5XUX1 488 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 PUSL1Q8N0Z8 303 aaKnown RBP6.64□□□□□ -1.35
SF3B3-201ENST00000302516 SMIM8Q96KF7 97 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 OR2A4O95047 310 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 LEPROTL1O95214 131 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 ZNF721Q8TF20 911 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 SFRP2Q96HF1 295 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 OR2A7Q96R45 310 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 FZR1Q9UM11 496 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 PI4KAP42356 2102 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 CD40P25942 277 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 EFNB2P52799 333 aa6.64□□□□□ -1.35
SF3B3-201ENST00000302516 CIRBPQ14011 172 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms