RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TNFSF18Q9UNG2 199 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 A0A0D9SG52 128 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 ST8SIA5O15466 376 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 VDAC1P21796 283 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 GPR12P47775 334 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 RAB7AP51149 207 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 S100A10P60903 97 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 RAB32Q13637 225 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 SMCO1Q147U7 214 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 PRSS54Q6PEW0 395 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 FGFRL1Q8N441 504 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 CTSZQ9UBR2 303 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 DSCAML1Q8TD84 2053 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 OR2F2O95006 317 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 IGHV2-70P01814 119 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 RLN2P04090 185 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 DAOP14920 347 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 OR2F1Q13607 317 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 ZNF345Q14585 488 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 OPCMLQ14982 345 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 ZNF66Q6ZN08 573 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 TMUB2Q71RG4 321 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 TCTEX1D1Q8N7M0 179 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 DCUN1D4Q92564 292 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 RAB1CQ92928 201 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 ZNF714Q96N38 554 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 HSD17B10Q99714 261 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 ARL6Q9H0F7 186 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 ITGB1BP2Q9UKP3 347 aa12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 KLF2Q9Y5W3 355 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-201ENST00000300302 NFYBP25208 207 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 THOC7Q6I9Y2 204 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 ACOT7LQ6ZUV0 252 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 HEXA-AS1Q9H8Q6 139 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 ABCA4P78363 2273 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 LYL1P12980 280 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 AP2S1P53680 142 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.333e-9■■■■■ 32.6
HERPUD1-201ENST00000300302 EIF4EBP1Q13541 118 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 FAM212BQ9NTI7 297 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-201ENST00000300302 TRBV23-1A0A0A0MS06 115 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 GPR37O15354 613 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 FCN3O75636 299 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 CLDN1O95832 211 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 SCGB1D2O95969 90 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 ZNF273Q14593 569 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 Q3ZCU0 254 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 NMSQ5H8A3 153 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 TMEM200BQ69YZ2 307 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 ZNF767PQ75MW2 155 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 RAB39BQ96DA2 213 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 CHODLQ9H9P2 273 aa12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 RPUSD1Q9UJJ7 312 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-201ENST00000300302 CLEC18AA5D8T8 446 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 H0YIZ8 118 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 PPIHO43447 177 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 TMEM155Q4W5P6 130 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 BTNL3Q6UXE8 466 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 HEPN1Q6WQI6 88 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 FOXRED2Q8IWF2 684 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 SLC7A5P1Q8MH63 180 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 CLEC18CQ8NCF0 446 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 OR8H1Q8NGG4 311 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 OR5AC2Q9NZP5 309 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 MIOXQ9UGB7 285 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 GAB2Q9UQC2 676 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 KMT2BQ9UMN6 2715 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 DEDDO75618 318 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 LY6HO94772 140 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 ATG12O94817 140 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF134P52741 427 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 TMEM33P57088 247 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF585BQ52M93 769 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 AVPI1Q5T686 147 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 LSM10Q969L4 123 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 RRNAD1Q96FB5 475 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 IFI27L2Q9H2X8 130 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 LSM5Q9Y4Y9 91 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 U3KQ87 197 aa12.95□□□□□ -0.34
HERPUD1-201ENST00000300302 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 RAB29O14966 203 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 IGHV3-7P01780 117 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms