RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MDH2P40926 338 aaKnown RBP20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 OR3A1P47881 315 aa20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 CDX1P47902 265 aaPredicted RBP20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 RPL30P62888 115 aaKnown RBP20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 SLC35E3Q7Z769 313 aa20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 BCL2L2Q92843 193 aaPredicted RBP20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 TINAGQ9UJW2 476 aa20.57■□□□□ 0.88
SPTSSA-201ENST00000298130 A0A087WWC5 75 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 TRBV6-6A0A0A6YYG2 114 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 FAM210BQ96KR6 192 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 SLC25A22Q9H936 323 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 TMEM9BQ9NQ34 198 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 MAP1LC3B2A6NCE7 125 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 TRGC1P0CF51 173 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 S100PP25815 95 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 AESQ08117 197 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 WDR25Q64LD2 544 aaPredicted RBP20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 GTF3AQ92664 365 aaKnown RBP20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 MAP1LC3BQ9GZQ8 125 aa20.56■□□□□ 0.88
SPTSSA-201ENST00000298130 SP1P08047 785 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 BMP5P22003 454 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 LRRC75BQ2VPJ9 315 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 C5orf30Q96GV9 206 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 OR2D2Q9H210 308 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 ABI3Q9P2A4 366 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 SPRR3Q9UBC9 169 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 IGHV3-43A0A0B4J1X8 118 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 IGHV3-43DP0DP04 118 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 S100A2P29034 98 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 SLC38A11Q08AI6 406 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 FBXW9Q5XUX1 488 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 LINC00596Q86U02 117 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 RPP25LQ8N5L8 163 aaKnown RBP20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 SLC25A40Q8TBP6 338 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 ZDHHC16Q969W1 377 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 RTL8AQ9BWD3 113 aa20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 WDR61Q9GZS3 305 aaKnown RBP20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 GAR1Q9NY12 217 aaKnown RBP20.55■□□□□ 0.88
SPTSSA-201ENST00000298130 SLC10A1Q14973 349 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 RPUSD4Q96CM3 377 aaKnown RBP20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 PKIBQ9C010 78 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 CISD1Q9NZ45 108 aaKnown RBP20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 DEFB108AA8MXU0 73 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 PPP1CBP62140 327 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 ADIRFQ15847 76 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 LTC4SQ16873 150 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 ZNF383Q8NA42 475 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 RFESDQ8TAC1 157 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 LHX4Q969G2 390 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 LSM10Q969L4 123 aaKnown RBP20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 GP6Q9HCN6 339 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 UFSP2Q9NUQ7 469 aa20.54■□□□□ 0.88
SPTSSA-201ENST00000298130 PGA5P0DJD9 388 aa20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 LNP1A1A4G5 178 aa20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 LY86O95711 162 aa20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 HBG1P69891 147 aa20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 HBG2P69892 147 aa20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 LIN7CQ9NUP9 197 aaKnown RBP20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 COLQQ9Y215 455 aaPredicted RBP20.53■□□□□ 0.88
SPTSSA-201ENST00000298130 SMPD2O60906 423 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 ZNF737O75373 536 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 AGFG2O95081 481 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 TUBG1P23258 451 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 MPV17P39210 176 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 MPLP40238 635 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 NKX6-1P78426 367 aaPredicted RBP20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 ACSM6Q6P461 480 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 TAF15Q92804 592 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 SNX22Q96L94 193 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 RBMXL2O75526 392 aaKnown RBP20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 TBC1D28Q2M2D7 210 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 DHRS13Q6UX07 377 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 DPPA3Q6W0C5 159 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 OBP2BQ9NPH6 170 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 SLC39A9Q9NUM3 307 aa20.52■□□□□ 0.88
SPTSSA-201ENST00000298130 TRAV1-1A0A0B4J248 108 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 FABP4P15090 132 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 RTP5Q14D33 572 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 Q6ZR03 302 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 MRGPRDQ8TDS7 321 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 SDF2L1Q9HCN8 221 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 S1PR2O95136 353 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 SLC25A6P12236 298 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 PSG7Q13046 419 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 OR5T1Q8NG75 326 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 KMT2EQ8IZD2 1858 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 OPA3Q9H6K4 179 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 SIRT7Q9NRC8 400 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 METRNQ9UJH8 293 aa20.51■□□□□ 0.87
SPTSSA-201ENST00000298130 C17orf98A8MV24 154 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 C12orf77C9JDV5 145 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 ZG16O60844 167 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 HAND1O96004 215 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 IGHV3-13P01766 116 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 IGHV3-7P01780 117 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 ERVK11-1P61568 191 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 ARG2P78540 354 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 TMEM41BQ5BJD5 291 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 MBD3L1Q8WWY6 194 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 DCTN5Q9BTE1 182 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms