RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 HINT2Q9BX68 163 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 FBLN5Q9UBX5 448 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 SPTBN5Q9NRC6 3674 aaKnown RBP12.73□□□□□ -0.37
SPIDR-201ENST00000297423 CREBBPQ92793 2442 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 A0A096LPE4 126 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 A0A1W2PPZ6 126 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 F6UZH7 168 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 M0QZK8 103 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
SPIDR-201ENST00000297423 IGKV3-11P04433 115 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 LMO1P25800 156 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 GALNSP34059 522 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 VASH2Q86V25 355 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 DTX1Q86Y01 620 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 TTC28Q96AY4 2481 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 TRIOO75962 3097 aa12.73□□□□□ -0.37
SPIDR-201ENST00000297423 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 TRAPPC2LH3BP13 241 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 EFNA2O43921 213 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 UCP2P55851 309 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 SRYQ05066 204 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 STARD4Q96DR4 205 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 B3GAT1Q9P2W7 334 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 C19orf25Q9UFG5 118 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-201ENST00000297423 TECTAO75443 2155 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 TRAF3IP2O43734 574 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-201ENST00000297423 C1QTNF9P0C862 333 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 IL3RAP26951 378 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 MKXQ8IYA7 352 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 NEIL1Q96FI4 390 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-201ENST00000297423 A0A0G2JRQ6 117 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 KBTBD11O94819 623 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF32P17041 273 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 PRR31Q5SQ13 230 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 SLC23A3Q6PIS1 610 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 OR6C3Q9NZP0 311 aa12.72□□□□□ -0.37
SPIDR-201ENST00000297423 B4E171 279 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 MGST1P10620 155 aaKnown RBP12.71□□□□□ -0.37
SPIDR-201ENST00000297423 TSPAN7P41732 249 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 CLN8Q9UBY8 286 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 IGKV1D-12P01611 117 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 OR5G3P0C626 314 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 BCL3P20749 454 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 TRAPPC2LQ9UL33 140 aa12.71□□□□□ -0.37
SPIDR-201ENST00000297423 PTRH2Q9Y3E5 179 aaKnown RBP12.71□□□□□ -0.37
SPIDR-201ENST00000297423 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 SP9P0CG40 484 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 SLC25A6P12236 298 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 TDGF1P13385 188 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 MAS1LP35410 378 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 CDKN1AP38936 164 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 ARL16Q0P5N6 197 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.38
SPIDR-201ENST00000297423 TECTBQ96PL2 329 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF552Q9H707 407 aaPredicted RBP12.71□□□□□ -0.38
SPIDR-201ENST00000297423 SLC17A3O00476 420 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 MSMO1Q15800 293 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 APH1AQ96BI3 265 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 OCIAD1Q9NX40 245 aa12.71□□□□□ -0.38
SPIDR-201ENST00000297423 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 TRAV38-1A0A0B4J264 116 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 A0A1W2PQD3 144 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 TNFSF11O14788 317 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 RRP8O43159 456 aaKnown RBP12.7□□□□□ -0.38
SPIDR-201ENST00000297423 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
SPIDR-201ENST00000297423 EXT1Q16394 746 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 POC1BQ8TC44 478 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 SPSB1Q96BD6 273 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 RAB40CQ96S21 281 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 DERL1Q9BUN8 251 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 NAT8BQ9UHF3 227 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 LOC102725191A0A1B0GVB3 256 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 SLC22A20A6NK97 555 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF726P1Q15940 193 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 SLC25A47Q6Q0C1 308 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 CYP2G1PQ6ZSU1 146 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
SPIDR-201ENST00000297423 OR1L6Q8NGR2 347 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 CDH20Q9HBT6 801 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 A0A1B0GW64 132 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 SERF1AO75920 110 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 RND2P52198 227 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 TM2D1Q9BX74 207 aa12.7□□□□□ -0.38
SPIDR-201ENST00000297423 RPL36A-HNRNPH2H7BZ11 118 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 IGHMP01871 453 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 YRDCQ86U90 279 aaKnown RBP12.69□□□□□ -0.38
SPIDR-201ENST00000297423 ZNF439Q8NDP4 499 aa12.69□□□□□ -0.38
SPIDR-201ENST00000297423 PRRG4Q9BZD6 226 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms