RNA–Protein interactions for RNA: ENST00000295926.7

CCNL1-202, Transcript of cyclin L1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNL1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-202ENST00000295926 ZNF787Q6DD87 383 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 HIPK2Q9H2X6 1198 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 USF3Q68DE3 2245 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 CLDN1O95832 211 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 IGHV2-5P01817 119 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 OR8U8P0C7N1 319 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 MAS1LP35410 378 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
CCNL1-202ENST00000295926 PRAMEF6Q5VXH4 476 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 VWA1Q6PCB0 445 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 INO80CQ6PI98 192 aaPredicted RBP12.8□□□□□ -0.36
CCNL1-202ENST00000295926 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
CCNL1-202ENST00000295926 Q6ZT83 130 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 C11orf53Q8IXP5 236 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 TPRX1Q8N7U7 411 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 C5orf30Q96GV9 206 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 METTL1Q9UBP6 276 aaKnown RBP12.8□□□□□ -0.36
CCNL1-202ENST00000295926 ASPMQ8IZT6 3477 aa12.8□□□□□ -0.36
CCNL1-202ENST00000295926 HBZP02008 142 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 Q6ZR03 302 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 ZNF645Q8N7E2 425 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 MRGPRDQ8TDS7 321 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
CCNL1-202ENST00000295926 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 TMEM210A6NLX4 147 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 RNF212BA8MTL3 300 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 IFNA17P01571 189 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 S100A9P06702 114 aaKnown RBP12.79□□□□□ -0.36
CCNL1-202ENST00000295926 GABRA2P47869 451 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 FABP6P51161 128 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 BTNL3Q6UXE8 466 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 Q8WTZ3 238 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 WDR61Q9GZS3 305 aaKnown RBP12.79□□□□□ -0.36
CCNL1-202ENST00000295926 RBKSQ9H477 322 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 HES4Q9HCC6 221 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 MSL2Q9HCI7 577 aa12.79□□□□□ -0.36
CCNL1-202ENST00000295926 AP4M1O00189 453 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 S100A8P05109 93 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 CD55P08174 381 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 CXCL1P09341 107 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 LINC00205P59089 165 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 ERVFRD-1P60508 538 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 TNFRSF9Q07011 255 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 ELOBQ15370 118 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 TRIP6Q15654 476 aaKnown RBP12.78□□□□□ -0.36
CCNL1-202ENST00000295926 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
CCNL1-202ENST00000295926 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 DSPP15924 2871 aaKnown RBP12.78□□□□□ -0.36
CCNL1-202ENST00000295926 BCL2P10415 239 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 HOXC12P31275 282 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 CHD3Q12873 2000 aaKnown RBP12.78□□□□□ -0.36
CCNL1-202ENST00000295926 NCMAPQ5T1S8 102 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 FAM90A2PQ658T7 463 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 WDR31Q8NA23 367 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 RFESDQ8TAC1 157 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 COQ2Q96H96 371 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 DOCK11Q5JSL3 2073 aa12.78□□□□□ -0.36
CCNL1-202ENST00000295926 A0A087WWC5 75 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 IGHV3-43A0A0B4J1X8 118 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.77□□□□□ -0.36
CCNL1-202ENST00000295926 C17orf98A8MV24 154 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 TIMM8AO60220 97 aaPredicted RBP12.77□□□□□ -0.36
CCNL1-202ENST00000295926 S1PR2O95136 353 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 IGHV3-43DP0DP04 118 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 KIR2DL2P43627 348 aaPredicted RBP12.77□□□□□ -0.36
CCNL1-202ENST00000295926 GLIPR1P48060 266 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 RPS16P62249 146 aaKnown RBP12.77□□□□□ -0.36
CCNL1-202ENST00000295926 BEND4Q6ZU67 534 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 SLC35E3Q7Z769 313 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 C9orf106Q8NAJ2 232 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 MBD3L1Q8WWY6 194 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 TAF15Q92804 592 aaKnown RBP eCLIP12.77□□□□□ -0.36
CCNL1-202ENST00000295926 NINJ1Q92982 152 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 CLN8Q9UBY8 286 aa12.77□□□□□ -0.36
CCNL1-202ENST00000295926 TGIF2-C20orf24A0A0A6YYL0 155 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 OOEPA6NGQ2 149 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 PPIHO43447 177 aaKnown RBP12.77□□□□□ -0.37
CCNL1-202ENST00000295926 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
CCNL1-202ENST00000295926 IGKV3-15P01624 115 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 SSTR5P35346 364 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 SERF2P84101 59 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 SLC35E4Q6ICL7 350 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 TCTEX1D2Q8WW35 142 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 CXXC4Q9H2H0 198 aa12.77□□□□□ -0.37
CCNL1-202ENST00000295926 CISD1Q9NZ45 108 aaKnown RBP12.77□□□□□ -0.37
CCNL1-202ENST00000295926 ODAMA1E959 279 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 IGHG3P01860 377 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 SMIM6P0DI80 62 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 TLE1Q04724 770 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 FOXF2Q12947 444 aa12.76□□□□□ -0.37
CCNL1-202ENST00000295926 KIAA0141Q14154 515 aaPredicted RBP12.76□□□□□ -0.37
CCNL1-202ENST00000295926 ZNF674Q2M3X9 581 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms