RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ZPBPQ9BS86 351 aa14.21□□□□□ -0.13
CHRNE-201ENST00000293780 PSMG3Q9BT73 122 aaPredicted RBP14.21□□□□□ -0.13
CHRNE-201ENST00000293780 STRADBQ9C0K7 418 aa14.21□□□□□ -0.13
CHRNE-201ENST00000293780 TMEM9BQ9NQ34 198 aa14.21□□□□□ -0.13
CHRNE-201ENST00000293780 GPR179Q6PRD1 2367 aa14.21□□□□□ -0.14
CHRNE-201ENST00000293780 UBE2L5PA0A1B0GUS4 154 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 HMGB3O15347 200 aaKnown RBP14.2□□□□□ -0.14
CHRNE-201ENST00000293780 RAMP3O60896 148 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 IGKV1D-33P01593 117 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 IGKV1-33P01594 117 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 CD55P08174 381 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 RNF224P0DH78 156 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 MDKP21741 143 aaPredicted RBP14.2□□□□□ -0.14
CHRNE-201ENST00000293780 ERVK11-1P61568 191 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 FRZBQ92765 325 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 S100PBPQ96BU1 408 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 SDF2L1Q9HCN8 221 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 LIN7CQ9NUP9 197 aaKnown RBP14.2□□□□□ -0.14
CHRNE-201ENST00000293780 TRGC1P0CF51 173 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 HIST1H1BP16401 226 aaKnown RBP14.2□□□□□ -0.14
CHRNE-201ENST00000293780 HBG1P69891 147 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 HBG2P69892 147 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 RTL8AQ9BWD3 113 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 GPR61Q9BZJ8 451 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 RBKSQ9H477 322 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 ABI3Q9P2A4 366 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 USF3Q68DE3 2245 aa14.2□□□□□ -0.14
CHRNE-201ENST00000293780 A0A1B0GV90 55 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 B4DEV8 164 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 SEC14L6B5MCN3 397 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 NXPH2O95156 264 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 TMEM41BQ5BJD5 291 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 FBXW9Q5XUX1 488 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 WDYHV1Q96HA8 205 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 IL17BQ9UHF5 180 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 LRP5LA4QPB2 252 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 MAP1LC3B2A6NCE7 125 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 CLDN1O95832 211 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 GRPP07492 148 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 SP1P08047 785 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 RPS16P62249 146 aaKnown RBP14.19□□□□□ -0.14
CHRNE-201ENST00000293780 SERF2P84101 59 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 SLC38A11Q08AI6 406 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 SSX9Q7RTT3 188 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.19□□□□□ -0.14
CHRNE-201ENST00000293780 OR1L1Q8NH94 360 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 TAF15Q92804 592 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHRNE-201ENST00000293780 DDA1Q9BW61 102 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 MAP1LC3BQ9GZQ8 125 aa14.19□□□□□ -0.14
CHRNE-201ENST00000293780 CYB5R3P00387 301 aaPredicted RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 TFF1P04155 84 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 MOB1BQ7L9L4 216 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 RPP25LQ8N5L8 163 aaKnown RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 C5orf30Q96GV9 206 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 MBNL3Q9NUK0 354 aaKnown RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 SPENQ96T58 3664 aaKnown RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 PIGBOS1A0A0B4J2F0 54 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 CLDN34H7C241 214 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 PPP1R2P9O14990 202 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 PSPNO60542 156 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 ZNF737O75373 536 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 KRASP01116 189 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 G6PCP35575 357 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 RPL30P62888 115 aaKnown RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 ZNF816Q0VGE8 651 aaPredicted RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 SLC10A1Q14973 349 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 MRGPRGQ86SM5 289 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 ZNF808Q8N4W9 903 aaPredicted RBP14.18□□□□□ -0.14
CHRNE-201ENST00000293780 VAX2Q9UIW0 290 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 WIPI2Q9Y4P8 454 aa14.18□□□□□ -0.14
CHRNE-201ENST00000293780 PRR14LQ5THK1 2151 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 SMPD2O60906 423 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 PGA5P0DJD9 388 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 RND2P52198 227 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 PPP1CBP62140 327 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 NKX6-1P78426 367 aaPredicted RBP14.17□□□□□ -0.14
CHRNE-201ENST00000293780 TBC1D28Q2M2D7 210 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 WDR25Q64LD2 544 aaPredicted RBP14.17□□□□□ -0.14
CHRNE-201ENST00000293780 DBX2Q6ZNG2 339 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 CXorf67Q86X51 503 aaPredicted RBP14.17□□□□□ -0.14
CHRNE-201ENST00000293780 C1orf87Q8N0U7 546 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 HIST3H2BBQ8N257 126 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 LHX4Q969G2 390 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 MEGF10Q96KG7 1140 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 SPRR3Q9UBC9 169 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 TTC28Q96AY4 2481 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 SH2D1BO14796 132 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 OR3A1P47881 315 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 IDH3GP51553 393 aaPredicted RBP14.17□□□□□ -0.14
CHRNE-201ENST00000293780 CD81P60033 236 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 TNFRSF9Q07011 255 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 PNRC1Q12796 327 aaPredicted RBP14.17□□□□□ -0.14
CHRNE-201ENST00000293780 GAMTQ14353 236 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 ZNF146Q15072 292 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 Q3ZCU0 254 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 RNFT1Q5M7Z0 435 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 ACSM6Q6P461 480 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 TMEM14EPQ6UXP3 125 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 OR52L2PQ8NGH6 319 aa14.17□□□□□ -0.14
CHRNE-201ENST00000293780 SLC39A9Q9NUM3 307 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms