RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 TMEM203Q969S6 136 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 FBXO7Q9Y3I1 522 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 FOXI3A8MTJ6 420 aaPredicted RBP19.63■□□□□ 0.73
U2AF1-201ENST00000291552 I3L521 148 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 SOCS1O15524 211 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 RPS25P62851 125 aaKnown RBP19.63■□□□□ 0.73
U2AF1-201ENST00000291552 C19orf54Q5BKX5 351 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 FAM71F2Q6NXP2 309 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 ZNF491Q8N8L2 437 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 UFD1Q92890 307 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 CHCHD6Q9BRQ6 235 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 ABRACLQ9P1F3 81 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 SLC23A1Q9UHI7 598 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 AK3Q9UIJ7 227 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 SCOCQ9UIL1 159 aa19.63■□□□□ 0.73
U2AF1-201ENST00000291552 HUWE1Q7Z6Z7 4374 aaKnown RBP19.63■□□□□ 0.73
U2AF1-201ENST00000291552 STAB2Q8WWQ8 2551 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 TRBV6-6A0A0A6YYG2 114 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 CT45A6P0DMU7 189 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 CT45A5P0DMU8 189 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 CT45A7P0DMV0 189 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 C9orf66Q5T8R8 295 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 MOB1BQ7L9L4 216 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 OR11H1Q8NG94 326 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 PRR25Q96S07 402 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 CHMP1AQ9HD42 196 aaPredicted RBP19.62■□□□□ 0.73
U2AF1-201ENST00000291552 OR1A1Q9P1Q5 309 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 STEAP1Q9UHE8 339 aa19.62■□□□□ 0.73
U2AF1-201ENST00000291552 TRAV41A0A0B4J266 112 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 SEC14L6B5MCN3 397 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 GNB1P62873 340 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 RUNX1Q01196 453 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 TPBGQ13641 420 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 GLDNQ6ZMI3 551 aaPredicted RBP19.61■□□□□ 0.73
U2AF1-201ENST00000291552 FAM89BQ8N5H3 189 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 MINDY2Q8NBR6 621 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 SETD6Q8TBK2 473 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 ABHD14BQ96IU4 210 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 UBE2E2Q96LR5 201 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 AGMATQ9BSE5 352 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 FBXL15Q9H469 300 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 DUSP21Q9H596 190 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 PLEKHJ1Q9NW61 149 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 SCN3BQ9NY72 215 aa19.61■□□□□ 0.73
U2AF1-201ENST00000291552 LSM4Q9Y4Z0 139 aaKnown RBP19.61■□□□□ 0.73
U2AF1-201ENST00000291552 SLC17A2O00624 439 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 SOX15O60248 233 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 RAMP3O60896 148 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 SNRPBP14678 240 aaKnown RBP19.6■□□□□ 0.73
U2AF1-201ENST00000291552 HLA-DRB3P79483 266 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 LIN54Q6MZP7 749 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 OR5B12Q96R08 314 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 PIPOXQ9P0Z9 390 aa19.6■□□□□ 0.73
U2AF1-201ENST00000291552 H0YJW9 148 aa19.59■□□□□ 0.73
U2AF1-201ENST00000291552 RAB29O14966 203 aa19.59■□□□□ 0.73
U2AF1-201ENST00000291552 CRIP2P52943 208 aaPredicted RBP19.59■□□□□ 0.73
U2AF1-201ENST00000291552 TMEM50BP56557 158 aa19.59■□□□□ 0.73
U2AF1-201ENST00000291552 ZMAT5Q9UDW3 170 aaKnown RBP19.59■□□□□ 0.73
U2AF1-201ENST00000291552 VSIG4Q9Y279 399 aa19.59■□□□□ 0.73
U2AF1-201ENST00000291552 AK6Q9Y3D8 172 aaKnown RBP19.59■□□□□ 0.73
U2AF1-201ENST00000291552 DNAH7Q8WXX0 4024 aa19.58■□□□□ 0.73
U2AF1-201ENST00000291552 ITGB1BP1O14713 200 aa19.58■□□□□ 0.72
U2AF1-201ENST00000291552 PROP1O75360 226 aa19.58■□□□□ 0.72
U2AF1-201ENST00000291552 DCTN2Q13561 401 aaKnown RBP19.58■□□□□ 0.72
U2AF1-201ENST00000291552 TMEM65Q6PI78 240 aa19.58■□□□□ 0.72
U2AF1-201ENST00000291552 C11orf54Q9H0W9 315 aaPredicted RBP19.58■□□□□ 0.72
U2AF1-201ENST00000291552 PLGRKTQ9HBL7 147 aa19.58■□□□□ 0.72
U2AF1-201ENST00000291552 KIAA1456Q9P272 454 aa19.58■□□□□ 0.72
U2AF1-201ENST00000291552 OR5H14A6NHG9 310 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 RRHO14718 337 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 HSMCR30P0CW71 290 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 EGR2P11161 476 aaPredicted RBP19.57■□□□□ 0.72
U2AF1-201ENST00000291552 ARSBP15848 533 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 ECI1P42126 302 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 RAB9AP51151 201 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 CLDN12P56749 244 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 PLA2G7Q13093 441 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 ECSCRQ19T08 205 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 OR1N2Q8NGR9 330 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 ARHGAP5-AS1Q96IT6 56 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 URM1Q9BTM9 101 aaKnown RBP19.57■□□□□ 0.72
U2AF1-201ENST00000291552 ALX4Q9H161 411 aaPredicted RBP19.57■□□□□ 0.72
U2AF1-201ENST00000291552 RIMS4Q9H426 269 aaPredicted RBP19.57■□□□□ 0.72
U2AF1-201ENST00000291552 Q9N2K0 584 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 ISYNA1Q9NPH2 558 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 HSF4Q9ULV5 492 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 GAB2Q9UQC2 676 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 TPRKBQ9Y3C4 175 aa19.57■□□□□ 0.72
U2AF1-201ENST00000291552 IGKV1-6A0A0C4DH72 117 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 FCN1O00602 326 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 RGS10O43665 173 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 SCTP09683 121 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 CPEP16870 476 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 CX3CL1P78423 397 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 ZNF616Q08AN1 781 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 RAB11BQ15907 218 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 ZNF260Q3ZCT1 412 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 OR5AN1Q8NGI8 311 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 CASTOR1Q8WTX7 329 aa19.56■□□□□ 0.72
U2AF1-201ENST00000291552 PECRQ9BY49 303 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms