RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RNF115Q9Y4L5 304 aa7.97□□□□□ -1.13
TRIM55-201ENST00000276573 RP1L1Q8IWN7 2480 aaPredicted RBP7.96□□□□□ -1.13
TRIM55-201ENST00000276573 BORCS7-ASMTA0A0B4J1R7 106 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 IGSF23A1L1A6 192 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 LGALS8O00214 317 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 TMEM50AO95807 157 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 CLDN1O95832 211 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 LOXL3P58215 753 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 BRWD1-AS2P59051 145 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 TLE1Q04724 770 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 CATR1Q13166 79 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 C17orf58Q2M2W7 97 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 FAM209AQ5JX71 171 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 ZNF66Q6ZN08 573 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 TMEM252Q8N6L7 170 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 TCTEX1D1Q8N7M0 179 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 OR1S2Q8NGQ3 325 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 LINC01560Q8TB33 94 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 EDARADDQ8WWZ3 215 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 NEUROG1Q92886 237 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 MARC2Q969Z3 335 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 FAM212BQ9NTI7 297 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-201ENST00000276573 LYRM2Q9NU23 88 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-201ENST00000276573 CALYQ9NYX4 217 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 PLA2G2EQ9NZK7 142 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 GNG12Q9UBI6 72 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 NDRG3Q9UGV2 375 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 SESN1Q9Y6P5 492 aa7.96□□□□□ -1.14
TRIM55-201ENST00000276573 LRRC30A6NM36 301 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 FAM90A27PA6NNH2 459 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 C17orf98A8MV24 154 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 WRBO00258 174 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 FBXO24O75426 580 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 NXPH3O95157 252 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 CD3EP07766 207 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 CAV2P51636 162 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 AKR1C2P52895 323 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 DUX4L9Q6RFH8 374 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-201ENST00000276573 BTNL3Q6UXE8 466 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 ODF3L1Q8IXM7 274 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 SPAG16Q8N0X2 631 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 FAM216AQ8WUB2 273 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 CORO2AQ92828 525 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 SAT2Q96F10 170 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-201ENST00000276573 GINS3Q9BRX5 216 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 PRORYQ9H606 182 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 TAS2R3Q9NYW6 316 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 COQ3Q9NZJ6 369 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 CACNG5Q9UF02 275 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 MMP24Q9Y5R2 645 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 DYSFO75923 2080 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 CACNA1DQ01668 2161 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 SIGLEC5O15389 551 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 RAMP3O60896 148 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 PROP1O75360 226 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 APOBEC3AP31941 199 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-201ENST00000276573 ID4P47928 161 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 SULT1A2P50226 295 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 ADORA2A-AS1P86434 159 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 SWI5Q1ZZU3 235 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 MST1LQ2TV78 715 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 TCTEX1D2Q8WW35 142 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 LINC00052Q96N35 136 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 RAB40CQ96S21 281 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 HSD17B10Q99714 261 aaKnown RBP7.95□□□□□ -1.14
TRIM55-201ENST00000276573 MS4A5Q9H3V2 200 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 RAB9BQ9NP90 201 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 LPAR3Q9UBY5 353 aa7.95□□□□□ -1.14
TRIM55-201ENST00000276573 DSCAMO60469 2012 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 MAP1BP46821 2468 aaKnown RBP7.94□□□□□ -1.14
TRIM55-201ENST00000276573 ARID1AO14497 2285 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 TRGV10A0A0A0MS01 117 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 TRAV38-1A0A0B4J264 116 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 KBTBD11-OT1A0A1B0GTJ5 212 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-201ENST00000276573 LINC00473A8K010 186 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 ZNF705EA8MWA4 302 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-201ENST00000276573 KRBOX1C9JBD0 128 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 TMEM178BH3BS89 294 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 ITGB1BP1O14713 200 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 CLDN14O95500 239 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 SEC11BP0C7V7 166 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 P0C879 139 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 SFTPCP11686 197 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 ZP3P21754 424 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 GPR12P47775 334 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 ZNF134P52741 427 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 LINC00205P59089 165 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 RPL23AP62750 156 aaKnown RBP7.94□□□□□ -1.14
TRIM55-201ENST00000276573 ZNF816Q0VGE8 651 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-201ENST00000276573 Q3ZCU0 254 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 OR2B11Q5JQS5 317 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 FAM216BQ8N7L0 139 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 SAP30LQ9HAJ7 183 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 COA4Q9NYJ1 87 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 CLN8Q9UBY8 286 aa7.94□□□□□ -1.14
TRIM55-201ENST00000276573 GAB2Q9UQC2 676 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms