RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ZNF273Q14593 569 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 ESCO2Q56NI9 601 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 TMEM200BQ69YZ2 307 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 THAP6Q8TBB0 222 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 SPOCK3Q9BQ16 436 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 SDHAF2Q9NX18 166 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 TNFSF18Q9UNG2 199 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 GAB2Q9UQC2 676 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 MYO18BQ8IUG5 2567 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 L7N2F9 121 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 ZNF134P52741 427 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 ZNF585BQ52M93 769 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 PRSS54Q6PEW0 395 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 ZNF66Q6ZN08 573 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 ZNF841Q6ZN19 808 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 ZNF439Q8NDP4 499 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 ABHD14BQ96IU4 210 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 IFI27L2Q9H2X8 130 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 GAL3ST2Q9H3Q3 398 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 PLEKHF2Q9H8W4 249 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 FAM212BQ9NTI7 297 aaPredicted RBP13.49□□□□□ -0.25
TPM1-201ENST00000267996 GSKIPQ9P0R6 139 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 MBD2Q9UBB5 411 aa13.49□□□□□ -0.25
TPM1-201ENST00000267996 RPUSD1Q9UJJ7 312 aaKnown RBP13.49□□□□□ -0.25
TPM1-201ENST00000267996 CLEC18AA5D8T8 446 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 MMP23AO75900 390 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 LY6HO94772 140 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 SERPINE2P07093 398 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 C4BPBP20851 252 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 VDAC1P21796 283 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 SSTR2P30874 369 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 RPL30P62888 115 aaKnown RBP13.48□□□□□ -0.25
TPM1-201ENST00000267996 RAB32Q13637 225 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 TMEM155Q4W5P6 130 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 UTF1Q5T230 341 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 HEPN1Q6WQI6 88 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 TCTEX1D1Q8N7M0 179 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 CLEC18CQ8NCF0 446 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 MFFQ9GZY8 342 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 ARID1AO14497 2285 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 LRBAP50851 2863 aa13.48□□□□□ -0.25
TPM1-201ENST00000267996 TRBV23-1A0A0A0MS06 115 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 PROP1O75360 226 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 RAB7AP51149 207 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 DLX6P56179 175 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 ZNF345Q14585 488 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 OPCMLQ14982 345 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 CT45A1Q5HYN5 189 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 TMUB2Q71RG4 321 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 CT45A3Q8NHU0 189 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 IGFBPL1Q8WX77 278 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 RAB1CQ92928 201 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 ZNF714Q96N38 554 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 HSD17B10Q99714 261 aaKnown RBP13.47□□□□□ -0.25
TPM1-201ENST00000267996 CHODLQ9H9P2 273 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 RNF222A6NCQ9 220 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 GPR37O15354 613 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 SLC31A2O15432 143 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 OR2F2O95006 317 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 F12P00748 615 aaPredicted RBP13.47□□□□□ -0.25
TPM1-201ENST00000267996 S100A11P31949 105 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 GPR12P47775 334 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 TMEM33P57088 247 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 TLE4Q04727 773 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 SRSF1Q07955 248 aaKnown RBP eCLIP13.47□□□□□ -0.254e-10■■■□□ 14.7
TPM1-201ENST00000267996 CATR1Q13166 79 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 OR2F1Q13607 317 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 AVPI1Q5T686 147 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 PRAMEF5Q5TYX0 476 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 OR4D5Q8NGN0 318 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 H1FXQ92522 213 aaKnown RBP13.47□□□□□ -0.25
TPM1-201ENST00000267996 TIMD4Q96H15 378 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 SPIN2AQ99865 258 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 SPIN2BQ9BPZ2 258 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 ABHD14AQ9BUJ0 271 aa13.47□□□□□ -0.25
TPM1-201ENST00000267996 A0A0D9SG52 128 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 OVOL3O00110 214 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 CLDN1O95832 211 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 PET100P0DJ07 73 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 SLC25A6P12236 298 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 CCL3L1P16619 93 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 BRWD1-AS2P59051 145 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 Q3ZCU0 254 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 ACOT7LQ6ZUV0 252 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 KCNRGQ8N5I3 272 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.46□□□□□ -0.26
TPM1-201ENST00000267996 LSM10Q969L4 123 aaKnown RBP13.46□□□□□ -0.26
TPM1-201ENST00000267996 OR5AC2Q9NZP5 309 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 MIOXQ9UGB7 285 aa13.46□□□□□ -0.26
TPM1-201ENST00000267996 RALYQ9UKM9 306 aaKnown RBP13.46□□□□□ -0.26
TPM1-201ENST00000267996 MALRD1Q5VYJ5 2156 aa13.45□□□□□ -0.26
TPM1-201ENST00000267996 PPIHO43447 177 aaKnown RBP13.45□□□□□ -0.26
TPM1-201ENST00000267996 MBPP02686 304 aaPredicted RBP13.45□□□□□ -0.26
TPM1-201ENST00000267996 ZNF16P17020 682 aaPredicted RBP13.45□□□□□ -0.26
TPM1-201ENST00000267996 NFYBP25208 207 aa13.45□□□□□ -0.26
TPM1-201ENST00000267996 CDKN1AP38936 164 aa13.45□□□□□ -0.26
TPM1-201ENST00000267996 OR1S1Q8NH92 325 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms