RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PSG2P11465 335 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 MOGAT3Q86VF5 341 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 HOGA1Q86XE5 327 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 LHFPL5Q8TAF8 219 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 MBD3L1Q8WWY6 194 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 GMPPAQ96IJ6 420 aaPredicted RBP15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 ALX4Q9H161 411 aaPredicted RBP15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 PRR13Q9NZ81 148 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 BCL2P10415 239 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 DAOP14920 347 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 CCL28Q9NRJ3 127 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 LOC389332A0A1B0GUA5 103 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 J3QT63 122 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 LIFP15018 202 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 PNLIPP16233 465 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 OR4B1Q8NGF8 309 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 UQCR10Q9UDW1 63 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 ZNF324O75467 553 aaPredicted RBP15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 HES3Q5TGS1 186 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 RND1Q92730 232 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 LRRC75AQ8NAA5 344 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 PAXXQ9BUH6 204 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 A8MWL6 223 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 SGMS2Q8NHU3 365 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 OR2V2Q96R30 315 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 NPVFQ9HCQ7 196 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 PLXNB1O43157 2135 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 NAT2P11245 290 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 MAGEA5P43359 124 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 MRPL30Q8TCC3 161 aaKnown RBP15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 MRPS18AQ9NVS2 196 aaKnown RBP15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 TNFSF18Q9UNG2 199 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 DSPPQ9NZW4 1301 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 MT-ND6P03923 174 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 OR1K1Q8NGR3 316 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 HEXA-AS1Q9H8Q6 139 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 CACNA1HO95180 2353 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 H0Y980 276 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 GAPDHP04406 335 aaKnown RBP15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 CD1AP06126 327 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 CELA2BP08218 269 aaPredicted RBP15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 AESQ08117 197 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 PRNTQ86SH4 94 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 FAM222BQ8WU58 562 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 ATRXP46100 2492 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 NUDT3O95989 172 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 RRN3P1Q2M238 152 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 RCC2Q9P258 522 aaKnown RBP15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 NPIPB8E9PQR5 432 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 GPR35Q9HC97 309 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 HIGD1AQ9Y241 93 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 FAM219BQ5XKK7 198 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 LDLRAD3Q86YD5 345 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 TXNDC17Q9BRA2 123 aa15.24■□□□□ 0.03
NOTCH3-201ENST00000263388 NPIPB6E9PJ23 425 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 NUP37Q8NFH4 326 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 SLC25A10Q9UBX3 287 aaPredicted RBP15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 RBM11P57052 281 aaKnown RBP15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 FAM206AQ9NX38 181 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 CYB561D1Q8N8Q1 229 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 PCOLCE2Q9UKZ9 415 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 SS18L1O75177 396 aaPredicted RBP15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 ZNF735P0CB33 412 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 PARD6GQ9BYG4 376 aaPredicted RBP15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 ABHD14BQ96IU4 210 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 MS4A5Q9H3V2 200 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 A0A0G2JMZ2 1700 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 LRRC37A2A6NM11 1700 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 IGHV5-10-1A0A0J9YXX1 117 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 RNF224P0DH78 156 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 FBXW9Q5XUX1 488 aa15.23■□□□□ 0.03
NOTCH3-201ENST00000263388 EML6Q6ZMW3 1958 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 RIF1Q5UIP0 2472 aaKnown RBP15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 TRBV5-3A0A0A0MS03 114 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 RBFOX2O43251 390 aaKnown RBP eCLIP15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 RPL31P62899 125 aaKnown RBP15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 MRPL24Q96A35 216 aaKnown RBP15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 ARHGAP21Q5T5U3 1957 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 ATP6V0CP27449 155 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 TREM2Q9NZC2 230 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 ST6GALNAC2Q9UJ37 374 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 CYB5R3P00387 301 aaPredicted RBP15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 HERPUD1Q15011 391 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 FAM53AQ6NSI3 398 aaPredicted RBP15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 GPA33Q99795 319 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 CCL27Q9Y4X3 112 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 FADS6Q8N9I5 356 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 SGK494Q96LW2 274 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 ZNF79Q15937 498 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 PLA2G10O15496 165 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 ZNF645Q8N7E2 425 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 SIPA1L1O43166 1804 aa15.22■□□□□ 0.03
NOTCH3-201ENST00000263388 HPRT1P00492 218 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 HBZP02008 142 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 ZNF273Q14593 569 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 KCNMB1Q16558 191 aa15.21■□□□□ 0.03
NOTCH3-201ENST00000263388 PMCHL2Q9BQD1 86 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms