RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 FRZBQ92765 325 aa8.53□□□□□ -1.04
LIG3-201ENST00000262327 MRPS18CQ9Y3D5 142 aaKnown RBP8.53□□□□□ -1.04
LIG3-201ENST00000262327 CFAP47Q6ZTR5 3102 aa8.53□□□□□ -1.04
LIG3-201ENST00000262327 KIR2DS1A0A191URI9 304 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 CD55P08174 381 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 KIR2DS4P43632 304 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 KIR2DS1Q14954 304 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 RIPPLY2Q5TAB7 128 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 SCGB1C1Q8TD33 95 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 PSENENQ9NZ42 101 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 ZNF391Q9UJN7 358 aa8.52□□□□□ -1.04
LIG3-201ENST00000262327 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 A0A1B0GW64 132 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 A6NNC1 897 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 H0Y980 276 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 CRYABP02511 175 aaKnown RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 HSPB1P04792 205 aaKnown RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 LINC00614P0C842 121 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 BMP5P22003 454 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 TUBG1P23258 451 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 IL2RGP31785 369 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 CEBPDP49716 269 aaPredicted RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 GFRA1P56159 465 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 CD81P60033 236 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 ZNF324BQ6AW86 544 aaPredicted RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 ASCL5Q7RTU5 278 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 HAPLN4Q86UW8 402 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 OR5D13Q8NGL4 314 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 ABHD5Q8WTS1 349 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 OR2W1Q9Y3N9 320 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 BOD1L1Q8NFC6 3051 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 DNPH1O43598 174 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 PGA5P0DJD9 388 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 GLIPR1P48060 266 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 NKX6-1P78426 367 aaPredicted RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 IL24Q13007 206 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 SPINK9Q5DT21 86 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 FAM90A2PQ658T7 463 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 COLCA1Q6ZS62 124 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 NUFIP2Q7Z417 695 aaKnown RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 HIST3H2BBQ8N257 126 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 SNX22Q96L94 193 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 DLL3Q9NYJ7 618 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 OR14J1Q9UGF5 321 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 GAB2Q9UQC2 676 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 MAP1BP46821 2468 aaKnown RBP8.52□□□□□ -1.05
LIG3-201ENST00000262327 SVILO95425 2214 aa8.52□□□□□ -1.05
LIG3-201ENST00000262327 SPENQ96T58 3664 aaKnown RBP8.51□□□□□ -1.05
LIG3-201ENST00000262327 UBE2L5PA0A1B0GUS4 154 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 OR5H1A6NKK0 313 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 PPP1R2P9O14990 202 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 TESK1Q15569 626 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 FAM58AQ8N1B3 248 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 FAM210BQ96KR6 192 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 NOL4LQ96MY1 436 aaPredicted RBP8.51□□□□□ -1.05
LIG3-201ENST00000262327 PRSS50Q9UI38 385 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
LIG3-201ENST00000262327 DEGS1O15121 323 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 SYNGR2O43760 224 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 APLNRP35414 380 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 WNT5AP41221 380 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 LINC00205P59089 165 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 BAXQ07812 192 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 TMPRSS7Q7RTY8 843 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.51□□□□□ -1.05
LIG3-201ENST00000262327 OR10V1Q8NGI7 309 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 GATAD1Q8WUU5 269 aa8.51□□□□□ -1.05
LIG3-201ENST00000262327 RCC1LQ96I51 464 aaKnown RBP8.51□□□□□ -1.05
LIG3-201ENST00000262327 SERPINA7P05543 415 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 TDGF1P3P51864 188 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 ERVS71-1P61550 626 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 CXorf67Q86X51 503 aaPredicted RBP8.5□□□□□ -1.05
LIG3-201ENST00000262327 ZNF808Q8N4W9 903 aaPredicted RBP8.5□□□□□ -1.05
LIG3-201ENST00000262327 APOBEC3DQ96AK3 386 aaPredicted RBP8.5□□□□□ -1.05
LIG3-201ENST00000262327 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
LIG3-201ENST00000262327 OR4C12Q96R67 309 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 RBKSQ9H477 322 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 PCNX2A6NKB5 2137 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 PCSK5Q92824 1860 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 ANKRD30BLA7E2S9 258 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 IGLV2-14P01704 120 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 BCL2P10415 239 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 MAS1LP35410 378 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 LHX2P50458 406 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 GAGE1Q13065 139 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 RTP5Q14D33 572 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 ADIRFQ15847 76 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 ALKBH6Q3KRA9 238 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 SP5Q6BEB4 398 aaPredicted RBP8.5□□□□□ -1.05
LIG3-201ENST00000262327 OR5R1Q8NH85 324 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 RBMXL1Q96E39 390 aaKnown RBP8.5□□□□□ -1.05
LIG3-201ENST00000262327 CLEC18AA5D8T8 446 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 KRASP01116 189 aa8.5□□□□□ -1.05
LIG3-201ENST00000262327 IGKV1D-33P01593 117 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms