RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TENM3Q9P273 2699 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 PIGBOS1A0A0B4J2F0 54 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 IFNA7P01567 189 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 HLA-AP01891 365 aaKnown RBP10.9□□□□□ -0.66
SGCA-201ENST00000262018 IGHV4-38-2P0DP08 117 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 AKR1C4P17516 323 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 PRDX2P32119 198 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 OR3A1P47881 315 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 CYCSP99999 105 aaKnown RBP10.9□□□□□ -0.66
SGCA-201ENST00000262018 PAX5Q02548 391 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 COL10A1Q03692 680 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 HERPUD1Q15011 391 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 NLRC3Q7RTR2 1065 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 OR11L1Q8NGX0 322 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 MITD1Q8WV92 249 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 CABLES2Q9BTV7 478 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 MBNL3Q9NUK0 354 aaKnown RBP10.9□□□□□ -0.66
SGCA-201ENST00000262018 SLC23A1Q9UHI7 598 aa10.9□□□□□ -0.66
SGCA-201ENST00000262018 C14orf166Q9Y224 244 aaKnown RBP10.9□□□□□ -0.66
SGCA-201ENST00000262018 IGKV1D-17A0A075B6S4 117 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 IGKV1-6A0A0C4DH72 117 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 TMEM30CPA0ZSE6 113 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 TUSC2O75896 110 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 SFT2D2O95562 160 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
SGCA-201ENST00000262018 ZNF728P0DKX0 622 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 IRF2P14316 349 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 RCC1P18754 421 aaPredicted RBP10.89□□□□□ -0.67
SGCA-201ENST00000262018 AADACP22760 399 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 CD34P28906 385 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 SEC61A1P61619 476 aaKnown RBP10.89□□□□□ -0.67
SGCA-201ENST00000262018 ATXN7L3Q14CW9 347 aaPredicted RBP10.89□□□□□ -0.67
SGCA-201ENST00000262018 C2orf68Q2NKX9 166 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 C5orf24Q7Z6I8 188 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 C1orf87Q8N0U7 546 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 PIPOXQ9P0Z9 390 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 DNAJB11Q9UBS4 358 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 INSIG2Q9Y5U4 225 aa10.89□□□□□ -0.67
SGCA-201ENST00000262018 NPIPB11E5RHQ5 1161 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 TMEM178BH3BS89 294 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 GOSR2O14653 212 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 ZNF737O75373 536 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 SLC22A5O76082 557 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 DIRAS3O95661 229 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 PPYP01298 95 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 TK1P04183 234 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 RPS2P15880 293 aaKnown RBP10.88□□□□□ -0.67
SGCA-201ENST00000262018 PI3P19957 117 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 NFYAP23511 347 aaPredicted RBP10.88□□□□□ -0.67
SGCA-201ENST00000262018 VAMP1P23763 118 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 HERV-K104P61576 105 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 SUPT4H1P63272 117 aaKnown RBP10.88□□□□□ -0.67
SGCA-201ENST00000262018 HMGN3Q15651 99 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 SAMD5Q5TGI4 173 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 SLC38A6Q8IZM9 456 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 BOLLQ8N9W6 283 aaKnown RBP10.88□□□□□ -0.67
SGCA-201ENST00000262018 COQ2Q96H96 371 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 SNX22Q96L94 193 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 TRAPPC2LQ9UL33 140 aa10.88□□□□□ -0.67
SGCA-201ENST00000262018 IGHV3OR15-7A0A075B7D8 119 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 TRBV6-7A0A0A0MS04 114 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 SMLR1H3BR10 107 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 BET1O15155 118 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 ZNF205O95201 554 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 TFF1P04155 84 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 CD80P33681 288 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 DEFB112Q30KQ8 113 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 TEX36Q5VZQ5 186 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 LAMTOR1Q6IAA8 161 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 OR5T2Q8NGG2 359 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 OR5M8Q8NGP6 311 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 PPP1R35Q8TAP8 253 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 TOMM40LQ969M1 308 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 CHIAQ9BZP6 476 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 DCAF16Q9NXF7 216 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 COMMD9Q9P000 198 aa10.87□□□□□ -0.67
SGCA-201ENST00000262018 CRYM-AS1A6NIL9 109 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 DBX1A6NMT0 343 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 FSTL3O95633 263 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 CYB5R3P00387 301 aaPredicted RBP10.86□□□□□ -0.67
SGCA-201ENST00000262018 RPA2P15927 270 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 H2BFSP57053 126 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 FXYD4P59646 89 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 ZNF345Q14585 488 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 STUMQ69YW2 141 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 TMEM65Q6PI78 240 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 H1FOOQ8IZA3 346 aaPredicted RBP10.86□□□□□ -0.67
SGCA-201ENST00000262018 LINC01006Q8NI28 216 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 COQ8AQ8NI60 647 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 CASTOR1Q8WTX7 329 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 SDSLQ96GA7 329 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
SGCA-201ENST00000262018 TRAV39A0A0B4J263 110 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 A0A0D9SG52 128 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 OOEPA6NGQ2 149 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 G3V3Q6 166 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms