RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 RAB9BQ9NP90 201 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 SS18L2Q9UHA2 77 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-201ENST00000261556 COL11A2P13942 1736 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-201ENST00000261556 TET1Q8NFU7 2136 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 TRBV5-5A0A0J9YX44 114 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 SERTM1A2A2V5 107 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 K7EP13 123 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 NXPH1P58417 271 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 MGAT2Q10469 447 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 ST8SIA1Q92185 356 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 SF3B5Q9BWJ5 86 aaKnown RBP11.27□□□□□ -0.61
TMEM260-201ENST00000261556 PSENENQ9NZ42 101 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 SLC45A2Q9UMX9 530 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 RPL36A-HNRNPH2H7BZ11 118 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 MDH2P40926 338 aaKnown RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 ECI1P42126 302 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CEBPDP49716 269 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CAMPP49913 170 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 TMEM144Q7Z5S9 345 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 OR2T6Q8NHC8 308 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 WDR54Q9H977 334 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 A0A096LPE4 126 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 A0A1W2PPZ6 126 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CRYBA4P53673 196 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 SSX8Q7RTT4 187 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 OR51G1Q8NGK1 321 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 OR1L3Q8NH93 324 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 SARAFQ96BY9 339 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 IGHV3-15A0A0B4J1V0 119 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 KBTBD11O94819 623 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 NDUFB4O95168 129 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 GRPP07492 148 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 SRIP30626 198 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CLDN15P56746 228 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 PDLIM3Q53GG5 364 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 VN1R4Q7Z5H5 301 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 FBXL14Q8N1E6 418 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 DEFB124Q8NES8 71 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 SPACA9Q96E40 222 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CA1P00915 261 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 NPY1RP25929 384 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 COX14Q96I36 57 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 RTN4RQ9BZR6 473 aa11.26□□□□□ -0.61
TMEM260-201ENST00000261556 CISD1Q9NZ45 108 aaKnown RBP11.26□□□□□ -0.61
TMEM260-201ENST00000261556 MT-CO3P00414 261 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 ASPHD2Q6ICH7 369 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 C16orf47Q6ZP98 133 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-201ENST00000261556 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 GP6Q9HCN6 339 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 CDC42EP3Q9UKI2 254 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 C7orf71A4D174 169 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 A6NDN8 102 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 HTR1DP28221 377 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 EDDM3BP56851 147 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 PCK2Q16822 640 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
TMEM260-201ENST00000261556 PGPEP1LA6NFU8 196 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 PLPP3O14495 311 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 FABP2P12104 132 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 OR5AS1Q8N127 324 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 RSPO3Q9BXY4 272 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-201ENST00000261556 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
TMEM260-201ENST00000261556 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
TMEM260-201ENST00000261556 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 A0A0B4J2E0 115 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 A0A1B0GX12 115 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 IGSF23A1L1A6 192 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 OR5B21A6NL26 309 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 ADH4P08319 380 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 IGLC2P0DOY2 106 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 IGLC3P0DOY3 106 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 PSG9Q00887 426 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 FOXF1Q12946 379 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 RTN4RL2Q86UN3 420 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 OR4C12Q96R67 309 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 FRG2CA6NGY1 282 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 NUPR1O60356 82 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 HIST1H1EP10412 219 aaKnown RBP11.24□□□□□ -0.61
TMEM260-201ENST00000261556 TM4SF20Q53R12 229 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 CYP2G1PQ6ZSU1 146 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 OR10G4Q8NGN3 311 aa11.24□□□□□ -0.61
TMEM260-201ENST00000261556 OR10G9Q8NGN4 311 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms