RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 TOR1AO14656 332 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 ITGB1BP1O14713 200 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 ARG1P05089 322 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 BTCP35070 178 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 HLA-DRB5Q30154 266 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 LINC00311Q8N616 119 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 BEND2Q8NDZ0 799 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 OR4P4Q8NGL7 312 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 MRGPRFQ96AM1 343 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 MMP28Q9H239 520 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 MAST4O15021 2626 aa12.85□□□□□ -0.35
CCDC90B-201ENST00000260054 A8MV72 311 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 LYRM1O43325 122 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 PTTG1O95997 202 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 FSHBP01225 129 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 PRRX1P54821 245 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 FXYD4P59646 89 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 ASAH1Q13510 395 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 LDLRAD2Q5SZI1 272 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 RUSC1-AS1Q66K80 236 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 MOB3AQ96BX8 217 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 ABHD14BQ96IU4 210 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 C7orf50Q9BRJ6 194 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 FXYD6Q9H0Q3 95 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 RNF150Q9ULK6 438 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 SONP18583 2426 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 F8P00451 2351 aa12.84□□□□□ -0.35
CCDC90B-201ENST00000260054 IGHV1-69DA0A0B4J2H0 117 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 NAP1L6A6NFF2 107 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 IGHV1-69P01742 117 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 RAB7AP51149 207 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 HERV-K104P61576 105 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 GPR157Q5UAW9 335 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 IDO2Q6ZQW0 420 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 LHFPL4Q7Z7J7 247 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 AKAP14Q86UN6 197 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 ODF3L1Q8IXM7 274 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 LYG1Q8N1E2 194 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 OR13C8Q8NGS7 320 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 TERB2Q8NHR7 220 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 PRRT1Q99946 306 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 OR2D2Q9H210 308 aa12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 RBM7Q9Y580 266 aaKnown RBP12.83□□□□□ -0.35
CCDC90B-201ENST00000260054 CENPXA8MT69 81 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 CLEC9AQ6UXN8 241 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 BRD3OSQ6XYD6 125 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 OR10X1Q8NGY0 326 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 SECTM1Q8WVN6 248 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 TOMM40LQ969M1 308 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 CREB3L1Q96BA8 519 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
CCDC90B-201ENST00000260054 NPFFO15130 113 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 SAA4P35542 130 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 CCR6P51684 374 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 FAM120AOSQ5T036 256 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 IL17RELQ6ZVW7 336 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 NANPQ8TBE9 248 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 FAM216AQ8WUB2 273 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 C17orf50Q8WW18 174 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 AJUBAQ96IF1 538 aa12.82□□□□□ -0.36
CCDC90B-201ENST00000260054 SAA2-SAA4A0A096LPE2 208 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 PROP1O75360 226 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 IGLV2-14P01704 120 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 SAA2P0DJI9 122 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 HTR1DP28221 377 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 BAMBIQ13145 260 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 DIAPH2-AS1Q14236 149 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 MIDNQ504T8 468 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 POC5Q8NA72 575 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 MARCH1Q8TCQ1 289 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF251Q9BRH9 671 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 SLC5A7Q9GZV3 580 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 CCL28Q9NRJ3 127 aa12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 SOX21Q9Y651 276 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-201ENST00000260054 LY6LH3BQJ8 138 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 RAB29O14966 203 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 GNRHRP30968 328 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 GPR12P47775 334 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF137PP52743 207 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 LGALS4P56470 323 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF818PQ6ZRF7 136 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 Q71RC1 249 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 PIPOXQ9P0Z9 390 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF221Q9UK13 617 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms