RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PHLDA2Q53GA4 152 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 GLIPR1L1Q6UWM5 242 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 OR2L13Q8N349 312 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 HCSTQ9UBK5 93 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 PRSS21Q9Y6M0 314 aa5.88□□□□□ -1.47
PDGFRA-201ENST00000257290 IGLV3-10A0A075B6K4 115 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SDCBPO00560 298 aaPredicted RBP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ORM1P02763 201 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 AMY1AP04745 511 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 NGFRP08138 427 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 BTCP35070 178 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 OR10G9Q8NGN4 311 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 KLK6Q92876 244 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 GPR146Q96CH1 333 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 PLA2G12AQ9BZM1 189 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 NEUROG3Q9Y4Z2 214 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SCN4AP35499 1836 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 TRBV20-1A0A075B6N2 111 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A1B0GW64 132 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ACTL6BO94805 426 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 CTGFP29279 349 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 RTP5Q14D33 572 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ENTPD8Q5MY95 495 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ABHD17CQ6PCB6 329 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SOSTQ9BQB4 213 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SLC25A33Q9BSK2 321 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 HINT3Q9NQE9 182 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 TAAR3PQ9P1P4 343 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 IGLC7A0M8Q6 106 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 NCBP2LA6PVI3 153 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 MLNRO43193 412 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 LGALS7P47929 136 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SPINT3P49223 89 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 IL11RAQ14626 422 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 PRSS8Q16651 343 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 CDKN3Q16667 212 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ETDBQ3ZM63 59 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 MBNL2Q5VZF2 373 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 Q6ZVL8 140 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 PPP1R27Q86WC6 154 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 FAM219AQ8IW50 185 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 IKZF5Q9H5V7 419 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 TEX48A0A1B0GUV7 120 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 LRRC3CA6NJW4 275 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SLC17A2O00624 439 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 PITX3O75364 302 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 PRSS1P07477 247 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 RGRP47804 291 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 FER1L6Q2WGJ9 1857 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 BARX1Q9HBU1 254 aaPredicted RBP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 SELENOKQ9Y6D0 94 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 K7EQS6 105 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 CBLN1P23435 193 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 CD38P28907 300 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 UCNP55089 124 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 EWSR1Q01844 656 aaKnown RBP eCLIP5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 IHHQ14623 411 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 ANXA2RQ3ZCQ2 193 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 CD200R1LQ6Q8B3 271 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 LYRM4Q9HD34 91 aa5.87□□□□□ -1.47
PDGFRA-201ENST00000257290 IL11P20809 199 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF114Q8NC26 417 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 NHP2Q9NX24 153 aaKnown RBP5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TMED7Q9Y3B3 224 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 RPL36A-HNRNPH2H7BZ11 118 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TIMM8AO60220 97 aaPredicted RBP5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 IL2RAP01589 272 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 SP1P08047 785 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 FAM157BP0CG42 384 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 LTBRP36941 435 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 NOXO1Q8NFA2 376 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 OXGR1Q96P68 337 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TAC3Q9UHF0 121 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TRAV24A0A0B4J272 114 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A0J9YW62 118 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 CHST1O43916 411 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 BCL3P20749 454 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 HOXD9P28356 352 aaPredicted RBP5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 PSG5Q15238 335 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 CST6Q15828 149 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 DEFB125Q8N687 156 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 PSENENQ9NZ42 101 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 IL17CQ9P0M4 197 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TRAV2A0A0B4J234 112 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 FABP5P3A8MUU1 101 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 FAM106CPP0CH98 169 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 RPL27P61353 136 aaKnown RBP5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 BTG2P78543 158 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 FAM106AQ4KMX7 169 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 OR10J3Q5JRS4 329 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TPRX1Q8N7U7 411 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF611Q8N823 705 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 TXNDC17Q9BRA2 123 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 C9JAW5 83 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 IGLV3-25P01717 112 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 ADMP35318 185 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms