RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ZDHHC11Q9H8X9 412 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 PLEKHA3Q9HB20 300 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 TUBG2Q9NRH3 451 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 WNT16Q9UBV4 365 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 SDK2Q58EX2 2172 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 KCNAB3O43448 404 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BKO60814 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BJP06899 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 WNT2P09544 360 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 PF4V1P10720 104 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM11P17152 192 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BOP23527 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BBP33778 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BDP58876 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 ERVFC1-1P60608 527 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BCP62807 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF90Q03938 601 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 CLN3Q13286 438 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST2H2BEQ16778 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
UBE4A-201ENST00000252108 CST9LP1Q5W188 147 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 WDR31Q8NA23 367 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 OR10G9Q8NGN4 311 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 OR10G7Q8NGN6 311 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 CMTM2Q8TAZ6 248 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 MRPL30Q8TCC3 161 aaKnown RBP3.56□□□□□ -1.84
UBE4A-201ENST00000252108 Q8WTZ3 238 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 SNX22Q96L94 193 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 GNRHR2Q96P88 292 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 GPR61Q9BZJ8 451 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 LIME1Q9H400 295 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 PATZ1Q9HBE1 687 aaKnown RBP3.56□□□□□ -1.84
UBE4A-201ENST00000252108 TRBV6-6A0A0A6YYG2 114 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM30CPA0ZSE6 113 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 SPINT2O43291 252 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 SPRY1O43609 319 aaPredicted RBP3.56□□□□□ -1.84
UBE4A-201ENST00000252108 SUMO1P63165 101 aaKnown RBP3.56□□□□□ -1.84
UBE4A-201ENST00000252108 PRDX4Q13162 271 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 LRRC75BQ2VPJ9 315 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 COL5A1-AS1Q5SY13 56 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 C16orf82Q7Z2V1 217 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 GAPTQ8N292 157 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 MEGF10Q96KG7 1140 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 WFIKKN1Q96NZ8 548 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 SLC7A10Q9NS82 523 aa3.56□□□□□ -1.84
UBE4A-201ENST00000252108 A0A1W2PNU3 283 aaPredicted RBP3.55□□□□□ -1.84
UBE4A-201ENST00000252108 IGSF23A1L1A6 192 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 NKX6-3A6NJ46 265 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 H0YL77 283 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ANGPTL7O43827 346 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 PI4KAP42356 2102 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ELLP55199 621 aaPredicted RBP3.55□□□□□ -1.84
UBE4A-201ENST00000252108 RNPS1Q15287 305 aaKnown RBP3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TIGITQ495A1 244 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 PDZD11Q5EBL8 140 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ETV3LQ6ZN32 361 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 COLCA1Q6ZS62 124 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 S100A7AQ86SG5 101 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 C1orf174Q8IYL3 243 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 FAM58AQ8N1B3 248 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 C3orf56Q8N813 242 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM171Q8WVE6 324 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 LIN37Q96GY3 246 aaPredicted RBP3.55□□□□□ -1.84
UBE4A-201ENST00000252108 OR2H1Q9GZK4 316 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 CACNG5Q9UF02 275 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 LAMA5O15230 3695 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 LRRC30A6NM36 301 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TNFSF11O14788 317 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ZIC3O60481 467 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 GYPAP02724 150 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF32P17041 273 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 NPBWR2P48146 333 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF154Q13106 437 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TESK1Q15569 626 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF124Q15973 351 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 FFAR4Q5NUL3 377 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 C6orf15Q6UXA7 325 aaPredicted RBP3.55□□□□□ -1.84
UBE4A-201ENST00000252108 GGNQ86UU5 652 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 ODF3L1Q8IXM7 274 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 OR2D3Q8NGH3 330 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 OR4A16Q8NH70 328 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TAF15Q92804 592 aaKnown RBP eCLIP3.55□□□□□ -1.84
UBE4A-201ENST00000252108 OR6C1Q96RD1 312 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 PARD6AQ9NPB6 346 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM167BQ9NRX6 74 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 PRR13Q9NZ81 148 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 NAGKQ9UJ70 344 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 IGHV5-10-1A0A0J9YXX1 117 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 J3QT63 122 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 SMPD2O60906 423 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 TBC1D28Q2M2D7 210 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 CEACAM21Q3KPI0 293 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 OR52M1Q8NGK5 317 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 OR10G8Q8NGN5 311 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 HPSE2Q8WWQ2 592 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
UBE4A-201ENST00000252108 WNT2BQ93097 391 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms