RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KRTCAP3Q53RY4 240 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 BTNL3Q6UXE8 466 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 ASCL5Q7RTU5 278 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 GCSAMQ8N6F7 178 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 STRAPQ9Y3F4 350 aaKnown RBP18.12■□□□□ 0.49
CLN6-201ENST00000249806 CUL9Q8IWT3 2517 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 SRRM5B3KS81 715 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 ATP6V1G2-DDX39BF2Z307 99 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 SPRY3O43610 288 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 SYNGR2O43760 224 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 LINC00205P59089 165 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 RPL23AP62750 156 aaKnown RBP18.11■□□□□ 0.49
CLN6-201ENST00000249806 CBLN2Q8IUK8 224 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 RAB40CQ96S21 281 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 PCNX1Q96RV3 2341 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 MKRN2OSH3BPM6 223 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 TRIM77I1YAP6 450 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 ZNF737O75373 536 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 SNAPINO95295 136 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 KLF3P57682 345 aaPredicted RBP18.11■□□□□ 0.49
CLN6-201ENST00000249806 LTC4SQ16873 150 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 FAM180AQ6UWF9 173 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 MOGAT3Q86VF5 341 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 LURAP1Q96LR2 239 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 SFXN3Q9BWM7 321 aa18.11■□□□□ 0.49
CLN6-201ENST00000249806 RNF212BA8MTL3 300 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 A8MXE2 369 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 PPT1P50897 306 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 BRWD1-AS2P59051 145 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 ZNF816Q0VGE8 651 aaPredicted RBP18.1■□□□□ 0.49
CLN6-201ENST00000249806 EIF4EBP1Q13541 118 aaPredicted RBP18.1■□□□□ 0.49
CLN6-201ENST00000249806 GUK1Q16774 197 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 STX12Q86Y82 276 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 EIF5A2Q9GZV4 153 aaKnown RBP18.1■□□□□ 0.49
CLN6-201ENST00000249806 WSB1Q9Y6I7 421 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 CEP295Q9C0D2 2601 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 KRASP01116 189 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 PLPPR2Q96GM1 343 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 ATP5SQ99766 215 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 TOLLIPQ9H0E2 274 aa18.1■□□□□ 0.49
CLN6-201ENST00000249806 C15orf65H3BRN8 121 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 NFYBP25208 207 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 G6PCP35575 357 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 SULT1A1P50225 295 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 ZBTB34Q8NCN2 500 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 ZNRF1Q8ND25 227 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 MEGF10Q96KG7 1140 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 PSENENQ9NZ42 101 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 TP53TG5Q9Y2B4 290 aa18.09■□□□□ 0.49
CLN6-201ENST00000249806 C17orf98A8MV24 154 aa18.08■□□□□ 0.49
CLN6-201ENST00000249806 GPR37O15354 613 aa18.08■□□□□ 0.49
CLN6-201ENST00000249806 SMUG1Q53HV7 270 aa18.08■□□□□ 0.49
CLN6-201ENST00000249806 DOCK11Q5JSL3 2073 aa18.08■□□□□ 0.49
CLN6-201ENST00000249806 ST8SIA5O15466 376 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 METTL15P1P0C7V9 234 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 FAM201AQ5SY85 155 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 CISD2Q8N5K1 135 aaKnown RBP18.08■□□□□ 0.48
CLN6-201ENST00000249806 COMMD1Q8N668 190 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 ITLN1Q8WWA0 313 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 KCNJ16Q9NPI9 418 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 PSG11Q9UQ72 335 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 MMP24Q9Y5R2 645 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 ADGRG4Q8IZF6 3080 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 DSCAMO60469 2012 aa18.08■□□□□ 0.48
CLN6-201ENST00000249806 CCL20P78556 96 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 ARL16Q0P5N6 197 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 DOLPP1Q86YN1 238 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 CLRN3Q8NCR9 226 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 OR10Z1Q8NGY1 313 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 TCTEX1D2Q8WW35 142 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 MRPL37Q9BZE1 423 aaKnown RBP18.07■□□□□ 0.48
CLN6-201ENST00000249806 IGLV3-9A0A075B6K5 115 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 CFHR2P36980 270 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 AGMATQ9BSE5 352 aa18.07■□□□□ 0.48
CLN6-201ENST00000249806 UMAD1C9J7I0 102 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 SPINT2O43291 252 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 S1PR2O95136 353 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 PEA15Q15121 130 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 C3orf36Q3SXR2 165 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 GNPNAT1Q96EK6 184 aaPredicted RBP18.06■□□□□ 0.48
CLN6-201ENST00000249806 FBXO7Q9Y3I1 522 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 ODAMA1E959 279 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 LINC00473A8K010 186 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 TOR1AO14656 332 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 CLDN1O95832 211 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 FOXC1Q12948 553 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 DHRS7BQ6IAN0 325 aaPredicted RBP18.06■□□□□ 0.48
CLN6-201ENST00000249806 THNSL2Q86YJ6 484 aa18.06■□□□□ 0.48
CLN6-201ENST00000249806 A0A0G2JNJ9 132 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 LHBP01229 141 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 CCKARP32238 428 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 UBE2KP61086 200 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 PAX5Q02548 391 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 CATR1Q13166 79 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 Q3ZCU0 254 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 SPANXN5Q5MJ07 72 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 HAPLN4Q86UW8 402 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 SNX22Q96L94 193 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 Q9UFV3 132 aa18.05■□□□□ 0.48
CLN6-201ENST00000249806 SH3BGRL2Q9UJC5 107 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms