RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 OR1A1Q9P1Q5 309 aa19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 SMIM18P0DKX4 95 aa19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 RPS19P39019 145 aaKnown RBP19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 LSM3P62310 102 aaKnown RBP19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 ZNF260Q3ZCT1 412 aa19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 C9orf152Q5JTZ5 239 aa19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 OR5H6Q8NGV6 325 aa19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 WIPF2Q8TF74 440 aaPredicted RBP19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 NABP2Q9BQ15 211 aa19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 C11orf54Q9H0W9 315 aaPredicted RBP19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 DCSTAMPQ9H295 470 aa19.36■□□□□ 0.69
SDF2L1-201ENST00000248958 IGKV1-6A0A0C4DH72 117 aa19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 NCBP2LA6PVI3 153 aaKnown RBP19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 FBXO24O75426 580 aa19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 C2orf68Q2NKX9 166 aa19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 OR10J5Q8NHC4 309 aa19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 AGMATQ9BSE5 352 aa19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 MRPS26Q9BYN8 205 aaKnown RBP19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 DIABLOQ9NR28 239 aa19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 LIN7CQ9NUP9 197 aaKnown RBP19.35■□□□□ 0.69
SDF2L1-201ENST00000248958 ZNF736B4DX44 427 aaPredicted RBP19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 GSTT2P0CG29 244 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 GSTT2BP0CG30 244 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 TGFBR1P36897 503 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 OR3A3P47888 321 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 GNG2P59768 71 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 TREML4Q6UXN2 200 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 SLC25A38Q96DW6 304 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 MRPL20Q9BYC9 149 aaKnown RBP19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 RDH8Q9NYR8 311 aa19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 ZNF230Q9UIE0 474 aaPredicted RBP19.34■□□□□ 0.69
SDF2L1-201ENST00000248958 TRBV6-7A0A0A0MS04 114 aa19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 TMEM95Q3KNT9 176 aa19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 CENPVQ7Z7K6 275 aaPredicted RBP19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 KCTD12Q96CX2 325 aaKnown RBP19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 ABHD14BQ96IU4 210 aa19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 ZNF251Q9BRH9 671 aa19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 ZNF221Q9UK13 617 aa19.33■□□□□ 0.68
SDF2L1-201ENST00000248958 TMEM235A6NFC5 223 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 SH2D7A6NKC9 451 aaPredicted RBP19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 BET1O15155 118 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 MC5RP33032 325 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 ANKRD13BQ86YJ7 626 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 Q8N9W7 124 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 SLC25A46Q96AG3 418 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 RASL11BQ9BPW5 248 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 PARP12Q9H0J9 701 aaKnown RBP19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 ABCG5Q9H222 651 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 MMP27Q9H306 513 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 ELF5Q9UKW6 265 aaPredicted RBP19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 GAB2Q9UQC2 676 aa19.32■□□□□ 0.68
SDF2L1-201ENST00000248958 OR5H14A6NHG9 310 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 IGHG2P01859 326 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 CSF1P09603 554 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 CTXN2P0C2S0 81 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 IGSF11Q5DX21 431 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 C11orf44Q8N8P7 122 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 OR5AU1Q8NGC0 362 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 MAFIPQ8WZ33 124 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 S100A16Q96FQ6 103 aaKnown RBP19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 GINS4Q9BRT9 223 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 PLSCR3Q9NRY6 295 aa19.31■□□□□ 0.68
SDF2L1-201ENST00000248958 TRAV18A0A075B6X5 111 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 GPR12P47775 334 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 RPL39P5Q59GN2 51 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 SLC35E3Q7Z769 313 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 FOXRED2Q8IWF2 684 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 NUDCD2Q8WVJ2 157 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 ST6GALNAC5Q9BVH7 336 aa19.3■□□□□ 0.68
SDF2L1-201ENST00000248958 KCNAB3O43448 404 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 CT45A6P0DMU7 189 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 CT45A5P0DMU8 189 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 CT45A7P0DMV0 189 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 CD28P10747 220 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 VBP1P61758 197 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 NCS1P62166 190 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 UBE2NLQ5JXB2 153 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 NDUFA11Q86Y39 141 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 OR4X2Q8NGF9 303 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 CHPT1Q8WUD6 406 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 RNF150Q9ULK6 438 aa19.29■□□□□ 0.68
SDF2L1-201ENST00000248958 GABARAPO95166 117 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 F2RL1P55085 397 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 ACTBP60709 375 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 MMDQ15546 238 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 FAM71E2Q8N5Q1 922 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 OR5AN1Q8NGI8 311 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 CMTM3Q96MX0 182 aa19.28■□□□□ 0.68
SDF2L1-201ENST00000248958 XRCC3O43542 346 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 RBBP9O75884 186 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 OPN1MWP04001 364 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 TFAP2AP05549 437 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 OPN1MW2P0DN77 364 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 OPN1MW3P0DN78 364 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 ALDH3B2P48448 385 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 CNIH2Q6PI25 160 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 GPR141Q7Z602 305 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 H1FOOQ8IZA3 346 aaPredicted RBP19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 ACOT12Q8WYK0 555 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms