RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LSM10Q969L4 123 aaKnown RBP21.49■■□□□ 1.03
RAB40C-201ENST00000248139 HEATR1Q9H583 2144 aaKnown RBP21.49■■□□□ 1.03
RAB40C-201ENST00000248139 LOC102723971A0A1B0GUV8 181 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 C12orf77C9JDV5 145 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 CLN5O75503 358 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 CLDN1O95832 211 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 ELOBQ15370 118 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 TVP23CQ96ET8 276 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 SMDT1Q9H4I9 107 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 MSL2Q9HCI7 577 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 MBNL3Q9NUK0 354 aaKnown RBP21.49■■□□□ 1.03
RAB40C-201ENST00000248139 LIN7CQ9NUP9 197 aaKnown RBP21.49■■□□□ 1.03
RAB40C-201ENST00000248139 DEFB108AA8MXU0 73 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 NKX2-8O15522 239 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 CCL11P51671 97 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 ZNF146Q15072 292 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 MRGPRDQ8TDS7 321 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 RCC1LQ96I51 464 aaKnown RBP21.48■■□□□ 1.03
RAB40C-201ENST00000248139 CLN8Q9UBY8 286 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 MGAQ8IWI9 3026 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 RP1L1Q8IWN7 2480 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-201ENST00000248139 NPIPB11E5RHQ5 1161 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 MDH2P40926 338 aaKnown RBP21.48■■□□□ 1.03
RAB40C-201ENST00000248139 LTC4SQ16873 150 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 ZNF674Q2M3X9 581 aa21.48■■□□□ 1.03
RAB40C-201ENST00000248139 RBMXL1Q96E39 390 aaKnown RBP21.48■■□□□ 1.03
RAB40C-201ENST00000248139 METTL1Q9UBP6 276 aaKnown RBP21.48■■□□□ 1.03
RAB40C-201ENST00000248139 SLC25A6P12236 298 aa21.47■■□□□ 1.03
RAB40C-201ENST00000248139 MAP1BP46821 2468 aaKnown RBP21.47■■□□□ 1.03
RAB40C-201ENST00000248139 FABP6P51161 128 aa21.47■■□□□ 1.03
RAB40C-201ENST00000248139 KIAA0141Q14154 515 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-201ENST00000248139 PLA2G2CQ5R387 149 aa21.47■■□□□ 1.03
RAB40C-201ENST00000248139 VWA1Q6PCB0 445 aa21.47■■□□□ 1.03
RAB40C-201ENST00000248139 DCTN5Q9BTE1 182 aa21.47■■□□□ 1.03
RAB40C-201ENST00000248139 AP4M1O00189 453 aa21.47■■□□□ 1.03
RAB40C-201ENST00000248139 S100A9P06702 114 aaKnown RBP21.47■■□□□ 1.03
RAB40C-201ENST00000248139 MRPL49Q13405 166 aaKnown RBP21.47■■□□□ 1.03
RAB40C-201ENST00000248139 UNKLQ9H9P5 680 aaKnown RBP21.47■■□□□ 1.03
RAB40C-201ENST00000248139 M0R296 226 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 HBE1P02100 147 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 CD200P41217 278 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 RAB2AP61019 212 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 RBKSQ9H477 322 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 ZDHHC11Q9H8X9 412 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 WIPI2Q9Y4P8 454 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 IGKV1D-33P01593 117 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 IGKV1-33P01594 117 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 DEFA4P12838 97 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 GABRA2P47869 451 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 KHDC3LQ587J8 217 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 FAM90A2PQ658T7 463 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 MOB1BQ7L9L4 216 aa21.46■■□□□ 1.03
RAB40C-201ENST00000248139 GMPPAQ96IJ6 420 aaPredicted RBP21.46■■□□□ 1.03
RAB40C-201ENST00000248139 IL2RGP31785 369 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 SSTR5P35346 364 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 GABRA6Q16445 453 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 C11orf53Q8IXP5 236 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 ZDHHC16Q969W1 377 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 TMPRSS5Q9H3S3 457 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 TREM2Q9NZC2 230 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 INTS1Q8N201 2190 aaKnown RBP21.45■■□□□ 1.02
RAB40C-201ENST00000248139 C17orf98A8MV24 154 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 LINC00587B1AMM8 73 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 S1PR2O95136 353 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 IFNA17P01571 189 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 LRRC75BQ2VPJ9 315 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 Q8IYB0 196 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 MALSU1Q96EH3 234 aa21.45■■□□□ 1.02
RAB40C-201ENST00000248139 HBZP02008 142 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 TNFSF10P50591 281 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 NDUFA6P56556 154 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 BRWD1-AS2P59051 145 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 SEBOXQ9HB31 216 aaPredicted RBP21.44■■□□□ 1.02
RAB40C-201ENST00000248139 CEBPZOSA8MTT3 80 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 CYB5BO43169 146 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 RAC2P15153 192 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 GLIPR1P48060 266 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 TGFBR3Q03167 851 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 SLC38A11Q08AI6 406 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 GALMQ96C23 342 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 COQ2Q96H96 371 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 SSX3Q99909 188 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 WDR61Q9GZS3 305 aaKnown RBP21.44■■□□□ 1.02
RAB40C-201ENST00000248139 KCNIP1Q9NZI2 227 aa21.44■■□□□ 1.02
RAB40C-201ENST00000248139 PTBP3O95758 552 aaKnown RBP21.43■■□□□ 1.02
RAB40C-201ENST00000248139 IGHV3-13P01766 116 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 IGHV3-7P01780 117 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 BCL2P10415 239 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 MDKP21741 143 aaPredicted RBP21.43■■□□□ 1.02
RAB40C-201ENST00000248139 FOXF2Q12947 444 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 SNIP1Q8TAD8 396 aaKnown RBP21.43■■□□□ 1.02
RAB40C-201ENST00000248139 OR5H1A6NKK0 313 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 IQCF6A8MYZ5 107 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 CTAG1AP78358 180 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 FDCSPQ8NFU4 85 aa21.43■■□□□ 1.02
RAB40C-201ENST00000248139 HBG1P69891 147 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 HBG2P69892 147 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 TNFRSF9Q07011 255 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 TMEM178AQ8NBL3 297 aa21.42■■□□□ 1.02
RAB40C-201ENST00000248139 S100A8P05109 93 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms