RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 L7N2F9 121 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 TNFSF12O43508 249 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 FCN3O75636 299 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 F12P00748 615 aaPredicted RBP11.71□□□□□ -0.53
SDF2-201ENST00000247020 SLC25A6P12236 298 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 PRSS54Q6PEW0 395 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 ABHD14BQ96IU4 210 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 C19orf12Q9NSK7 152 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.53
SDF2-201ENST00000247020 TNFSF18Q9UNG2 199 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 PSG11Q9UQ72 335 aa11.71□□□□□ -0.53
SDF2-201ENST00000247020 A0A0D9SG52 128 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 MPTX1A8MV57 137 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 OR2F2O95006 317 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 LYNX1P0DP58 116 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 GPR12P47775 334 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 EFNA4P52798 201 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 IFITM2Q01629 132 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 OR2F1Q13607 317 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 ZNF273Q14593 569 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 TMEM200BQ69YZ2 307 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 C8orf31Q8N9H6 132 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 OR8B3Q8NGG8 313 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 OR51H1Q8NH63 302 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.54
SDF2-201ENST00000247020 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.54
SDF2-201ENST00000247020 OR8B2Q96RD0 313 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 ABHD14AQ9BUJ0 271 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 SDHAF2Q9NX18 166 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 BOLA1Q9Y3E2 137 aa11.71□□□□□ -0.54
SDF2-201ENST00000247020 A0A1W2PPH5 198 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 OVOL3O00110 214 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 ST8SIA5O15466 376 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 ARPC5O15511 151 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 ATG12O94817 140 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 CXCL2P19875 107 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 S100A11P31949 105 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 LRRC37A5PQ49AS3 106 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 NMSQ5H8A3 153 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 ZNF841Q6ZN19 808 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 C8orf46Q8TAG6 207 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 CD300LFQ8TDQ1 290 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 H1FXQ92522 213 aaKnown RBP11.7□□□□□ -0.54
SDF2-201ENST00000247020 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 MFFQ9GZY8 342 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 IFI27L2Q9H2X8 130 aa11.7□□□□□ -0.54
SDF2-201ENST00000247020 CLDN1O95832 211 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 RBP4P02753 201 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 RLN2P04090 185 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 OMGP23515 440 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 RAB32Q13637 225 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 SMCO1Q147U7 214 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 LTC4SQ16873 150 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
SDF2-201ENST00000247020 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
SDF2-201ENST00000247020 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 FAM219AQ8IW50 185 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 FGFRL1Q8N441 504 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 IGFBPL1Q8WX77 278 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 GPHA2Q96T91 129 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 GSKIPQ9P0R6 139 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 MBD2Q9UBB5 411 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 RNF150Q9ULK6 438 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 DOCK11Q5JSL3 2073 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 HRNRQ86YZ3 2850 aaPredicted RBP11.69□□□□□ -0.54
SDF2-201ENST00000247020 SMG1Q96Q15 3661 aaKnown RBP11.69□□□□□ -0.54
SDF2-201ENST00000247020 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
SDF2-201ENST00000247020 A0A087X0M5 115 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 A0A1B0GX30 115 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 F5H0A9 414 aaPredicted RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 RAB29O14966 203 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 RBFOX2O43251 390 aaKnown RBP eCLIP11.68□□□□□ -0.54
SDF2-201ENST00000247020 PPIHO43447 177 aaKnown RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 KIR2DS2P43631 304 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 ZNF134P52741 427 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 DLX6P56179 175 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 OPCMLQ14982 345 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 FAM53AQ6NSI3 398 aaPredicted RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 KCNRGQ8N5I3 272 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 LINC00311Q8N616 119 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 INO80EQ8NBZ0 244 aaPredicted RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 OR4D5Q8NGN0 318 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 RNF126Q9BV68 326 aa11.68□□□□□ -0.54
SDF2-201ENST00000247020 PAIP2BQ9ULR5 123 aaKnown RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 YLPM1P49750 1951 aaKnown RBP11.68□□□□□ -0.54
SDF2-201ENST00000247020 A0A1B0GU03 582 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 C17orf98A8MV24 154 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 DEDDO75618 318 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 RNF224P0DH78 156 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 DUTP33316 252 aaKnown RBP11.67□□□□□ -0.54
SDF2-201ENST00000247020 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
SDF2-201ENST00000247020 CDKN1AP38936 164 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
SDF2-201ENST00000247020 PRAMEF5Q5TYX0 476 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms