RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
NUP85-201ENST00000245544 TRAV38-1A0A0B4J264 116 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 RAMP3O60896 148 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 NXPH3O95157 252 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 RLN2P04090 185 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 S100GP29377 79 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 MORN2Q502X0 79 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 OR2B11Q5JQS5 317 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 SDHAF2Q9NX18 166 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 OR6C3Q9NZP0 311 aa11.11□□□□□ -0.63
NUP85-201ENST00000245544 AKAP6Q13023 2319 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 IGHV1-69-2A0A0G2JMI3 117 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 KANTRA0A1W2PQU2 76 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 F2RL2O00254 374 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
NUP85-201ENST00000245544 SLC31A2O15432 143 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 PROP1O75360 226 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 MMP23AO75900 390 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 CLDN14O95500 239 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 SERPINE2P07093 398 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 PET100P0DJ07 73 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 HKR1P10072 659 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 NDUFB7P17568 137 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 VDAC1P21796 283 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 CXorf66Q5JRM2 361 aaPredicted RBP11.1□□□□□ -0.63
NUP85-201ENST00000245544 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 Q6ZRM9 215 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 C1orf87Q8N0U7 546 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 ST8SIA2Q92186 375 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
NUP85-201ENST00000245544 FAM234AQ9H0X4 552 aa11.1□□□□□ -0.63
NUP85-201ENST00000245544 KBTBD11-OT1A0A1B0GTJ5 212 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 A0A1W2PPE3 182 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 A0A1W2PPR1 153 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 B8ZZF3 427 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 C19orf84I3L1E1 186 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 WNT2P09544 360 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 COL8A2P25067 703 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 GPR146Q96CH1 333 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 AQP10Q96PS8 301 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 CYTL1Q9NRR1 136 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 C19orf12Q9NSK7 152 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 SLC25A10Q9UBX3 287 aaPredicted RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 CLN8Q9UBY8 286 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 LINC00473A8K010 186 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 F5H0A9 414 aaPredicted RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 B3GALNT1O75752 331 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 IGKV1-5P01602 117 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 EPHA1P21709 976 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 Q3ZCU0 254 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 DMBX1Q8NFW5 382 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 IL22RA2Q969J5 263 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 BSCL2Q96G97 398 aaPredicted RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 MAGT1Q9H0U3 335 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 NCOR1P1Q9H4R4 102 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 LIN7CQ9NUP9 197 aaKnown RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 CTSZQ9UBR2 303 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 JPT1Q9UK76 154 aa11.09□□□□□ -0.63
NUP85-201ENST00000245544 ASH1LQ9NR48 2969 aaKnown RBP11.09□□□□□ -0.63
NUP85-201ENST00000245544 TRGV10A0A0A0MS01 117 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 NKX6-3A6NJ46 265 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 C17orf98A8MV24 154 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 YPEL1O60688 119 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 LY6HO94772 140 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 ZNF273Q14593 569 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 YPEL2Q96QA6 119 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 ARPC5LQ9BPX5 153 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 PLEKHF2Q9H8W4 249 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
NUP85-201ENST00000245544 VPS13CQ709C8 3753 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 SVEP1Q4LDE5 3571 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 DUXBA0A1W2PPF3 345 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 CLEC18AA5D8T8 446 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 ST8SIA3O43173 380 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 SOD3P08294 240 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
NUP85-201ENST00000245544 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 FAM74A1Q5RGS3 127 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 CLEC18CQ8NCF0 446 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 GSX2Q9BZM3 304 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
NUP85-201ENST00000245544 ZNF462Q96JM2 2506 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 NFYBP25208 207 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
NUP85-201ENST00000245544 LPAR6P43657 344 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 NKX2-1P43699 371 aaPredicted RBP11.07□□□□□ -0.64
NUP85-201ENST00000245544 ZNF816Q0VGE8 651 aaPredicted RBP11.07□□□□□ -0.64
NUP85-201ENST00000245544 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 PRAMEF5Q5TYX0 476 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 TCTEX1D2Q8WW35 142 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 RBMXL1Q96E39 390 aaKnown RBP11.07□□□□□ -0.64
NUP85-201ENST00000245544 IFI27L2Q9H2X8 130 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 C11orf1Q9H5F2 150 aa11.07□□□□□ -0.64
NUP85-201ENST00000245544 E5RGE8 158 aa11.06□□□□□ -0.64
NUP85-201ENST00000245544 CLDN1O95832 211 aa11.06□□□□□ -0.64
NUP85-201ENST00000245544 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms