RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 NFAM1Q8NET5 270 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-201ENST00000240185 JKAMPQ9P055 326 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 NUP205Q92621 2012 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-201ENST00000240185 TSPAN2O60636 221 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 EML2O95834 649 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 RELQ04864 619 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-201ENST00000240185 SRSF12Q8WXF0 261 aaKnown RBP12.05□□□□□ -0.48
TARDBP-201ENST00000240185 MRPS18AQ9NVS2 196 aaKnown RBP12.05□□□□□ -0.48
TARDBP-201ENST00000240185 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 SNAI2O43623 268 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 SELENOTP62341 195 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 MMDQ15546 238 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 MBNL2Q5VZF2 373 aaKnown RBP12.05□□□□□ -0.48
TARDBP-201ENST00000240185 NUDT11Q96G61 164 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 TMEM222Q9H0R3 208 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 MEGF9Q9H1U4 602 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 RBKSQ9H477 322 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 PLAC1Q9HBJ0 212 aa12.05□□□□□ -0.48
TARDBP-201ENST00000240185 PPP1R17O96001 155 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 IGHV4-34P06331 123 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 CBLN1P23435 193 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 NANOS3P60323 173 aaKnown RBP12.04□□□□□ -0.48
TARDBP-201ENST00000240185 H0Y980 276 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 UBE2L6O14933 153 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 TYMSP04818 313 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 TMEM95Q3KNT9 176 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 TJP1Q07157 1748 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 A0A1W2PPE3 182 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 C8orf82Q6P1X6 216 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-201ENST00000240185 VN1R4Q7Z5H5 301 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 ZNF764Q96H86 408 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-201ENST00000240185 ZNF414Q96IQ9 312 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 ABHD14BQ96IU4 210 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 TNFRSF19Q9NS68 423 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 GCM2O75603 506 aaPredicted RBP12.04□□□□□ -0.48
TARDBP-201ENST00000240185 VEGFBP49765 207 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 LINC00596Q86U02 117 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 PRSS27Q9BQR3 290 aa12.04□□□□□ -0.48
TARDBP-201ENST00000240185 A0A1W2PPC1 479 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 MYOGP15173 224 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 CRYBB3P26998 211 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 REG1BP48304 166 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
TARDBP-201ENST00000240185 KCNMB1Q16558 191 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 GAB4Q2WGN9 574 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 ZNF362Q5T0B9 420 aaPredicted RBP12.03□□□□□ -0.48
TARDBP-201ENST00000240185 NEUROG1Q92886 237 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 TMEM160Q9NX00 188 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 TRBV5-3A0A0A0MS03 114 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 IGHV5-51A0A0C4DH38 117 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 DANCRP0C864 163 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
TARDBP-201ENST00000240185 H2BFSP57053 126 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 SYT8Q8NBV8 401 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 ST6GALNAC6Q969X2 333 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 IGKV3D-15A0A087WSY6 115 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 IGKV3-15P01624 115 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 DLX6P56179 175 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 HIST1H1AQ02539 215 aaPredicted RBP12.03□□□□□ -0.48
TARDBP-201ENST00000240185 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 SPSB4Q96A44 273 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 MRAP2Q96G30 205 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 OR2H1Q9GZK4 316 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 ERGP11308 486 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 NUDT10Q8NFP7 164 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
TARDBP-201ENST00000240185 STRCP1A6NGW2 1772 aa12.03□□□□□ -0.48
TARDBP-201ENST00000240185 SMAD4Q13485 552 aaKnown RBP12.02□□□□□ -0.48
TARDBP-201ENST00000240185 TM4SF20Q53R12 229 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 TEX30Q5JUR7 227 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 R3HDMLQ9H3Y0 253 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 FHITP49789 147 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 PSG6Q00889 435 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 ZNF124Q15973 351 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 C10orf111Q8N326 155 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 OR10J6PQ8NGY7 276 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 RAB1BQ9H0U4 201 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 HEXA-AS1Q9H8Q6 139 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 PHLDA3Q9Y5J5 127 aa12.02□□□□□ -0.48
TARDBP-201ENST00000240185 ANOS1P23352 680 aa12.02□□□□□ -0.49
TARDBP-201ENST00000240185 DMRTA2Q96SC8 542 aa12.02□□□□□ -0.49
TARDBP-201ENST00000240185 ZNF576Q9H609 170 aa12.02□□□□□ -0.49
TARDBP-201ENST00000240185 FOXA3P55318 350 aaPredicted RBP12.02□□□□□ -0.49
TARDBP-201ENST00000240185 Q5BKY6 102 aa12.02□□□□□ -0.49
TARDBP-201ENST00000240185 TBL2Q9Y4P3 447 aaKnown RBP12.02□□□□□ -0.49
TARDBP-201ENST00000240185 PRDX2P32119 198 aa12.01□□□□□ -0.49
TARDBP-201ENST00000240185 RPS20P60866 119 aaKnown RBP12.01□□□□□ -0.49
TARDBP-201ENST00000240185 OR4A5Q8NH83 315 aa12.01□□□□□ -0.49
TARDBP-201ENST00000240185 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
TARDBP-201ENST00000240185 ANAPC13Q9BS18 74 aa12.01□□□□□ -0.49
TARDBP-201ENST00000240185 VCX2Q9H322 139 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms