RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRBV23-1A0A0A0MS06 115 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 KBTBD11-OT1A0A1B0GTJ5 212 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 C3orf80F5H4A9 247 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 SMAD7O15105 426 aaKnown RBP10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CYB5R3P00387 301 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-201ENST00000238688 OR5AC1P0C628 307 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CGB3P0DN86 165 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CGB7P0DN87 165 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 LYL1P12980 280 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 VDAC1P21796 283 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CD80P33681 288 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CEACAM6P40199 344 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 GLIPR1P48060 266 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 NKX2-5P52952 324 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-201ENST00000238688 ATP5J2P56134 94 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 C2orf68Q2NKX9 166 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 PHLDA2Q53GA4 152 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 LRRC10Q5BKY1 277 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 C11orf87Q6NUJ2 197 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF66Q6ZN08 573 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF818PQ6ZRF7 136 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 TBC1D26Q86UD7 250 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 BOLLQ8N9W6 283 aaKnown RBP10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CD300LFQ8TDQ1 290 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 GLYATL2Q8WU03 294 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 PPP1R1CQ8WVI7 109 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 RBPMSQ93062 196 aaKnown RBP10.94□□□□□ -0.66
SLIRP-201ENST00000238688 TMEM246Q9BRR3 403 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CLN8Q9UBY8 286 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 RBM7Q9Y580 266 aaKnown RBP10.94□□□□□ -0.66
SLIRP-201ENST00000238688 DOCK11Q5JSL3 2073 aa10.94□□□□□ -0.66
SLIRP-201ENST00000238688 IGKV1D-13A0A0B4J2D9 117 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 TNFRSF13BO14836 293 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-201ENST00000238688 PHF1O43189 567 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-201ENST00000238688 NDUFS7O75251 213 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 PGLYRP1O75594 196 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-201ENST00000238688 MPC2O95563 127 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 IGKV1-13P0DP09 117 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 CDKN1AP38936 164 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 IL15RAQ13261 267 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 SPRNQ5BIV9 151 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 LAMTOR1Q6IAA8 161 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 OR11H4Q8NGC9 324 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 OR13A1Q8NGR1 328 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 MRGPRDQ8TDS7 321 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 TIMD4Q96H15 378 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 HSD17B10Q99714 261 aaKnown RBP10.93□□□□□ -0.66
SLIRP-201ENST00000238688 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
SLIRP-201ENST00000238688 A0A1W2PPH5 198 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 FAM25EA8MYX2 175 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 L7N2F9 121 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 NDUFB3O43676 98 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 SIX6O95475 246 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 IGHV4-39P01824 125 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 RBP4P02753 201 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 RLN2P04090 185 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 SERPINE2P07093 398 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 S100A11P31949 105 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 NUP62P37198 522 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-201ENST00000238688 ARHGDIBP52566 201 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 EDDM3BP56851 147 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 EDDM3AQ14507 147 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 SMCO1Q147U7 214 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 IAH1Q2TAA2 248 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-201ENST00000238688 TMEM155Q4W5P6 130 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 PRSS54Q6PEW0 395 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF546Q86UE3 836 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 FAM219AQ8IW50 185 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 C8orf31Q8N9H6 132 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 INO80EQ8NBZ0 244 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-201ENST00000238688 ZNRF1Q8ND25 227 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 OR1L1Q8NH94 360 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 CCL17Q92583 94 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 LSM10Q969L4 123 aaKnown RBP10.92□□□□□ -0.66
SLIRP-201ENST00000238688 CCL28Q9NRJ3 127 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 CALYQ9NYX4 217 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 OR1A1Q9P1Q5 309 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 GNG12Q9UBI6 72 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 SLC25A10Q9UBX3 287 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-201ENST00000238688 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
SLIRP-201ENST00000238688 IGHV3OR15-7A0A075B7D8 119 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 SMLR1H3BR10 107 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 TMPRSS2O15393 492 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 RBFOX2O43251 390 aaKnown RBP eCLIP10.91□□□□□ -0.66
SLIRP-201ENST00000238688 MMP9P14780 707 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 KIR2DS2P43631 304 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 LGALSLQ3ZCW2 172 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-201ENST00000238688 GGNBP1Q5YKI7 109 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 PRR18Q8N4B5 295 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 ADTRPQ96IZ2 230 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 TNFSF18Q9UNG2 199 aa10.91□□□□□ -0.66
SLIRP-201ENST00000238688 MALRD1Q5VYJ5 2156 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 DNHD1Q96M86 4753 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 FXYD6-FXYD2A0A087WZ82 144 aa10.9□□□□□ -0.66
SLIRP-201ENST00000238688 A0A1B0GU03 582 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms