RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GLIPR1P48060 266 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 CCL20P78556 96 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 HOXA4Q00056 320 aaPredicted RBP13.53□□□□□ -0.24
UBE3D-201ENST00000237186 RUNX1Q01196 453 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 TLE4Q04727 773 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 CATR1Q13166 79 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 CR1LQ2VPA4 569 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 ZNF66Q6ZN08 573 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 ZNF525Q8N782 197 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 OR13A1Q8NGR1 328 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 LRRC29Q8WV35 223 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 SPENQ96T58 3664 aaKnown RBP13.53□□□□□ -0.24
UBE3D-201ENST00000237186 KCNJ16Q9NPI9 418 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 RNF150Q9ULK6 438 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 FBXO7Q9Y3I1 522 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 MEX3AA1L020 520 aaKnown RBP13.52□□□□□ -0.25
UBE3D-201ENST00000237186 RBFOX3A6NFN3 312 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 GPR37O15354 613 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 PPIHO43447 177 aaKnown RBP13.52□□□□□ -0.25
UBE3D-201ENST00000237186 HBE1P02100 147 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 BRWD1-AS2P59051 145 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 UBE2KP61086 200 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.25
UBE3D-201ENST00000237186 ARL16Q0P5N6 197 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 C1orf185Q5T7R7 199 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 AGMATQ9BSE5 352 aa13.52□□□□□ -0.25
UBE3D-201ENST00000237186 PSMG3Q9BT73 122 aaPredicted RBP13.52□□□□□ -0.25
UBE3D-201ENST00000237186 PRRC2CQ9Y520 2896 aaKnown RBP13.51□□□□□ -0.25
UBE3D-201ENST00000237186 RAMP3O60896 148 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 CRYABP02511 175 aaKnown RBP13.51□□□□□ -0.25
UBE3D-201ENST00000237186 IAPPP10997 89 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 GZMHP20718 246 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 HBG1P69891 147 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 HBG2P69892 147 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 TNFRSF9Q07011 255 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 TMEM267Q0VDI3 215 aaPredicted RBP13.51□□□□□ -0.25
UBE3D-201ENST00000237186 TMEM14EPQ6UXP3 125 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 THNSL2Q86YJ6 484 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 RBMXL3Q8N7X1 1067 aaKnown RBP13.51□□□□□ -0.25
UBE3D-201ENST00000237186 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 OR2Z1Q8NG97 314 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 S100PBPQ96BU1 408 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 RBMXL1Q96E39 390 aaKnown RBP13.51□□□□□ -0.25
UBE3D-201ENST00000237186 LAMP3Q9UQV4 416 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 PRELID3BQ9Y3B1 194 aa13.51□□□□□ -0.25
UBE3D-201ENST00000237186 SPINT2O43291 252 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 FOLR2P14207 255 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
UBE3D-201ENST00000237186 LRRC75BQ2VPJ9 315 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 HAPLN4Q86UW8 402 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 LRP11Q86VZ4 500 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 SNX22Q96L94 193 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 SFXN3Q9BWM7 321 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 UNKLQ9H9P5 680 aaKnown RBP13.5□□□□□ -0.25
UBE3D-201ENST00000237186 MLXQ9UH92 298 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 IGLV3-9A0A075B6K5 115 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 IGKV1D-17A0A075B6S4 117 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 C7orf77A4D0Y5 90 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 LHBP01229 141 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 CRYAAP02489 173 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 TFF1P04155 84 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 METTL15P1P0C7V9 234 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 SSTR5P35346 364 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 ZNF83P51522 516 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 RAB2AP61019 212 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 SERF2P84101 59 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 KRTCAP3Q53RY4 240 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 AWAT1Q58HT5 328 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 FAM53AQ6NSI3 398 aaPredicted RBP13.5□□□□□ -0.25
UBE3D-201ENST00000237186 GCSAMQ8N6F7 178 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 SCGB1C1Q8TD33 95 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 RXFP4Q8TDU9 374 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 HSD17B10Q99714 261 aaKnown RBP13.5□□□□□ -0.25
UBE3D-201ENST00000237186 RARRES2Q99969 163 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 NCOR1P1Q9H4R4 102 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.5□□□□□ -0.25
UBE3D-201ENST00000237186 DUSP13Q9UII6 198 aa13.5□□□□□ -0.25
UBE3D-201ENST00000237186 LRRC30A6NM36 301 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 C17orf98A8MV24 154 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 RAB29O14966 203 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 KLK10O43240 276 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 CLDN14O95500 239 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 CLDN1O95832 211 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 CRYBA1P05813 215 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 EGR1P18146 543 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 RHEBQ15382 184 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 PPP1R35Q8TAP8 253 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 SFT2D1Q8WV19 159 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 MUCL1Q96DR8 90 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 RPS10P5Q9NQ39 176 aa13.49□□□□□ -0.25
UBE3D-201ENST00000237186 MGST3O14880 152 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 NDUFA2O43678 99 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 TSPAN9O75954 239 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 KRASP01116 189 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 HSPB1P04792 205 aaKnown RBP13.48□□□□□ -0.25
UBE3D-201ENST00000237186 SOHLH1Q5JUK2 328 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 ZNF506Q5JVG8 444 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 AVPI1Q5T686 147 aa13.48□□□□□ -0.25
UBE3D-201ENST00000237186 SLC25A24Q6NUK1 477 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms