RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ZNF716A6NP11 495 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 S100GP29377 79 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 PSG4Q00888 419 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 RUNX1Q01196 453 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 HERPUD1Q15011 391 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 RAET1LQ5VY80 246 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 PLCXD3Q63HM9 321 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 HIST1H2BLQ99880 126 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 VAX2Q9UIW0 290 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 OR7C1O76099 320 aaPredicted RBP17.43■□□□□ 0.38
SNX3-201ENST00000230085 F2RP25116 425 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 ZNF154Q13106 437 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 GAMTQ14353 236 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 ZNF880Q6PDB4 577 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 MAGT1Q9H0U3 335 aa17.43■□□□□ 0.38
SNX3-201ENST00000230085 IFNA1P01562 189 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 GFRA1P56159 465 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 B3GALT5-AS1P59052 145 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 BRICD5Q6PL45 260 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 CALHM1Q8IU99 346 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 RNASE11Q8TAA1 199 aaKnown RBP17.42■□□□□ 0.38
SNX3-201ENST00000230085 PACRGQ96M98 296 aaPredicted RBP17.42■□□□□ 0.38
SNX3-201ENST00000230085 NOL4LQ96MY1 436 aaPredicted RBP17.42■□□□□ 0.38
SNX3-201ENST00000230085 RPRMQ9NS64 109 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 SPRR3Q9UBC9 169 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 TIMM9Q9Y5J7 89 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 URGCP-MRPS24S4R325 110 aa17.42■□□□□ 0.38
SNX3-201ENST00000230085 IGKV1D-13A0A0B4J2D9 117 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 SLC31A2O15432 143 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 PGLYRP1O75594 196 aaPredicted RBP17.41■□□□□ 0.38
SNX3-201ENST00000230085 IGKV1-13P0DP09 117 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 EDN3P14138 238 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 PDLIM4P50479 330 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 IGFBP7Q16270 282 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 Q3ZCU0 254 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 GFI1BQ5VTD9 330 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 ZNF787Q6DD87 383 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 CYP2G1PQ6ZSU1 146 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 BEND2Q8NDZ0 799 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 OR10A7Q8NGE5 316 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 CABLES2Q9BTV7 478 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 SRXN1Q9BYN0 137 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 PLK3Q9H4B4 646 aa17.41■□□□□ 0.38
SNX3-201ENST00000230085 SMCO3A2RU48 225 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 ST8SIA5O15466 376 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 MMP7P09237 267 aaPredicted RBP17.4■□□□□ 0.38
SNX3-201ENST00000230085 TAS2R60P59551 318 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 LRRC75BQ2VPJ9 315 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 SPIN3Q5JUX0 258 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 WDR25Q64LD2 544 aaPredicted RBP17.4■□□□□ 0.38
SNX3-201ENST00000230085 GFRALQ6UXV0 394 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 SLC25A26Q70HW3 274 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 SSX9Q7RTT3 188 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 RAB24Q969Q5 203 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 S100PBPQ96BU1 408 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 CRLF2Q9HC73 371 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 IGHV3-15A0A0B4J1V0 119 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 CNOT4O95628 575 aaKnown RBP17.4■□□□□ 0.38
SNX3-201ENST00000230085 PFN1P07737 140 aaKnown RBP17.4■□□□□ 0.38
SNX3-201ENST00000230085 FGF7P21781 194 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 IL2RGP31785 369 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 RAB4BP61018 213 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 RAB11AP62491 216 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 THNSL2Q86YJ6 484 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 ZNF525Q8N782 197 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 FOXB1Q99853 325 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 GNG13Q9P2W3 67 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 OR14J1Q9UGF5 321 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 NAT8Q9UHE5 227 aa17.4■□□□□ 0.38
SNX3-201ENST00000230085 IGKV1-6A0A0C4DH72 117 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 TMEM250H0YL14 139 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 AQP7O14520 342 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 TNFSF11O14788 317 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 ZNF726P1Q15940 193 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 TMEM217Q8N7C4 229 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 SCGB1C1Q8TD33 95 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 ACY3Q96HD9 319 aa17.39■□□□□ 0.37
SNX3-201ENST00000230085 A0A087X0M5 115 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 A0A1B0GX30 115 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 FAM90A26D6RGX4 464 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 SCTP09683 121 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 FABP4P15090 132 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 MDH2P40926 338 aaKnown RBP17.38■□□□□ 0.37
SNX3-201ENST00000230085 TMEM41BQ5BJD5 291 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 ST6GALNAC3Q8NDV1 305 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 PIGCQ92535 297 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 TMEM45BQ96B21 275 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 GPR146Q96CH1 333 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 REPIN1Q9BWE0 567 aaKnown RBP17.38■□□□□ 0.37
SNX3-201ENST00000230085 CCL28Q9NRJ3 127 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 ZNF462Q96JM2 2506 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 GCGP01275 180 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 COX5BP10606 129 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 HBG1P69891 147 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 HBG2P69892 147 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 MRPL49Q13405 166 aaKnown RBP17.38■□□□□ 0.37
SNX3-201ENST00000230085 ZNF665Q9H7R5 613 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 OR2W1Q9Y3N9 320 aa17.38■□□□□ 0.37
SNX3-201ENST00000230085 RTTNQ86VV8 2226 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 SS18L1O75177 396 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms