RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TEX38Q6PEX7 206 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
GPN3-201ENST00000228827 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 MRPL41Q8IXM3 137 aaKnown RBP11.18□□□□□ -0.62
GPN3-201ENST00000228827 LINC00482Q8N8I6 264 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 OR56B1Q8NGI3 324 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 DUX3Q96PT4 197 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 GON7Q9BXV9 100 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 Q9N2K0 584 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 ZFP57Q9NU63 452 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 PIPOXQ9P0Z9 390 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 TRBV6-6A0A0A6YYG2 114 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 A0A0B4J203 849 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 LDLRAD4O15165 306 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 PSMB9P28065 219 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 THBS3P49746 956 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 MOGAT2Q3SYC2 334 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 CXorf66Q5JRM2 361 aaPredicted RBP11.17□□□□□ -0.62
GPN3-201ENST00000228827 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 RCC1LQ96I51 464 aaKnown RBP11.17□□□□□ -0.62
GPN3-201ENST00000228827 RAB22AQ9UL26 194 aa11.17□□□□□ -0.62
GPN3-201ENST00000228827 TGP01266 2768 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 TRAV1-2A0A0B4J238 106 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 TRDV1A0A1B0GX56 115 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 SMIM30A4D0T7 59 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 RAB29O14966 203 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 ZBTB25P24278 435 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 CD200R1LQ6Q8B3 271 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 C11orf54Q9H0W9 315 aaPredicted RBP11.16□□□□□ -0.62
GPN3-201ENST00000228827 RNF150Q9ULK6 438 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 MGAT4AQ9UM21 535 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 WSB1Q9Y6I7 421 aa11.16□□□□□ -0.62
GPN3-201ENST00000228827 A0A075B6Q4 140 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 IFITM5A6NNB3 132 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 NBR2O15453 112 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 CD3GP09693 182 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 RAB3BP20337 219 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.62
GPN3-201ENST00000228827 MYCNOSP40205 109 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 RANBP1P43487 201 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 RAB25P57735 213 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
GPN3-201ENST00000228827 CFHR3Q02985 330 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 FOXE3Q13461 319 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 DEFB136Q30KP8 78 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 FAM71F2Q6NXP2 309 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 SPARTQ8N0X7 666 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 Q9H521 79 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 KCNK7Q9Y2U2 307 aa11.15□□□□□ -0.62
GPN3-201ENST00000228827 IGKV1-6A0A0C4DH72 117 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 TRDCB7Z8K6 153 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 H7C2Y5 167 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 MRPS14O60783 128 aaKnown RBP11.14□□□□□ -0.63
GPN3-201ENST00000228827 IGF1P05019 195 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 ELANEP08246 267 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 GNB3P16520 340 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 NR2C2APQ86WQ0 139 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 DRAXINQ8NBI3 349 aaPredicted RBP11.14□□□□□ -0.63
GPN3-201ENST00000228827 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 EDARADDQ8WWZ3 215 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 MAFIPQ8WZ33 124 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 RAX2Q96IS3 184 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 AGMATQ9BSE5 352 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 OR51J1Q9H342 316 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
GPN3-201ENST00000228827 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 G3V318 75 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 H0YJW9 148 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 ITGB1BP1O14713 200 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 BET1O15155 118 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 ATP6V0E1O15342 81 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 DUS4LO95620 317 aaKnown RBP11.13□□□□□ -0.63
GPN3-201ENST00000228827 IGHG4P01861 327 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 LINC00205P59089 165 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 PLGLAQ15195 96 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 LIN54Q6MZP7 749 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 NPBQ8NG41 125 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 P2RX4Q99571 388 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 DNAH3Q8TD57 4116 aa11.13□□□□□ -0.63
GPN3-201ENST00000228827 OR5H14A6NHG9 310 aa11.12□□□□□ -0.63
GPN3-201ENST00000228827 CCL24O00175 119 aa11.12□□□□□ -0.63
GPN3-201ENST00000228827 FABP7O15540 132 aa11.12□□□□□ -0.63
GPN3-201ENST00000228827 NDUFA3O95167 84 aa11.12□□□□□ -0.63
GPN3-201ENST00000228827 FCGR3AP08637 254 aa11.12□□□□□ -0.63
GPN3-201ENST00000228827 GSTP1P09211 210 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms