RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 C5orf52A6NGY3 159 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 FTH1P19P0C7X4 201 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 PMS2P11Q13670 270 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 EIF2S3LQ2VIR3 472 aaKnown RBP18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 IGF2-ASQ6U949 168 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 ZNF66Q6ZN08 573 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 RAB39BQ96DA2 213 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 COQ2Q96H96 371 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 TAAR6Q96RI8 345 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 NIPSNAP3BQ9BS92 247 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 SIRT7Q9NRC8 400 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 RPRMQ9NS64 109 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 CFAP54Q96N23 3096 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 A0A1W2PPE2 198 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 CXorf65A6NEN9 183 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 WNT9BO14905 357 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 AESQ08117 197 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 TMEM41BQ5BJD5 291 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 ZNF826PQ6ZT77 177 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 OR52L2PQ8NGH6 319 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 RSG1Q9BU20 258 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 RBKSQ9H477 322 aa18.44■□□□□ 0.54
SMARCD2-201ENST00000225742 B4DEV8 164 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 UBE2CO00762 179 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 ARG1P05089 322 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 SPANXN5Q5MJ07 72 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 ZNF787Q6DD87 383 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 CENPVQ7Z7K6 275 aaPredicted RBP18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 FAM24BQ8N5W8 94 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 CYB561D1Q8N8Q1 229 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 PROCRQ9UNN8 238 aa18.43■□□□□ 0.54
SMARCD2-201ENST00000225742 IGHV3-64DA0A0J9YX35 117 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 RAB29O14966 203 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 IFNA17P01571 189 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 SNRPEP62304 92 aaKnown RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 SLC38A11Q08AI6 406 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 Q6ZR03 302 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 MUCL1Q96DR8 90 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 OR4C12Q96R67 309 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 P2RX4Q99571 388 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 C12orf57Q99622 126 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 IGHV2OR16-5A0A0B4J2B6 119 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 LRRC30A6NM36 301 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 GALR2O43603 387 aaPredicted RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 CLDN14O95500 239 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 S100A8P05109 93 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 BCL2P10415 239 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 TAGLN2P37802 199 aaKnown RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 MEOX2P50222 304 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 PRAMEF6Q5VXH4 476 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 CXorf67Q86X51 503 aaPredicted RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 FAM90A1Q86YD7 464 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 DEFB124Q8NES8 71 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 CIB3Q96Q77 187 aaPredicted RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 MRPL37Q9BZE1 423 aaKnown RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 METTL1Q9UBP6 276 aaKnown RBP18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 WASF3Q9UPY6 502 aa18.42■□□□□ 0.54
SMARCD2-201ENST00000225742 IFNA1P01562 189 aa18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 ADH4P08319 380 aa18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 GABRA2P47869 451 aa18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 HTD2P86397 168 aa18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 COL10A1Q03692 680 aa18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 BHLHA15Q7RTS1 189 aaPredicted RBP18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 TAF15Q92804 592 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 C5orf30Q96GV9 206 aa18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 HSD17B10Q99714 261 aaKnown RBP18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 ZNF71Q9NQZ8 489 aaPredicted RBP18.41■□□□□ 0.54
SMARCD2-201ENST00000225742 hCG_1809904A0A1W2PP81 198 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 A0A1W2PR64 198 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 A0A1W2PRV1 198 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 CEACAM4O75871 244 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 CLDN1O95832 211 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 EIF2S3P41091 472 aaKnown RBP18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 RPL30P62888 115 aaKnown RBP18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 HEPN1Q6WQI6 88 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 MRGPRDQ8TDS7 321 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 TCTEX1D2Q8WW35 142 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 GNG13Q9P2W3 67 aa18.4■□□□□ 0.54
SMARCD2-201ENST00000225742 IGHV1-18A0A0C4DH31 117 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 SPINT2O43291 252 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 RAMP3O60896 148 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 LY86O95711 162 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 PTBP3O95758 552 aaKnown RBP18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 CGAP01215 116 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 FABP6P51161 128 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 DLK1P80370 383 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 PNRC1Q12796 327 aaPredicted RBP18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 SRSF6Q13247 344 aaKnown RBP18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 RCC1LQ96I51 464 aaKnown RBP18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 TMEM147Q9BVK8 224 aa18.39■□□□□ 0.54
SMARCD2-201ENST00000225742 OR5H1A6NKK0 313 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 TNFSF13O75888 250 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 G6PCP35575 357 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 S100A12P80511 92 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 FOXF2Q12947 444 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 ZNF726P1Q15940 193 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 BEND4Q6ZU67 534 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 MRGPRGQ86SM5 289 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 ZNF808Q8N4W9 903 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms