RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 LPAR6P43657 344 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 PAX9P55771 341 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 RPL30P62888 115 aaKnown RBP24.69■■□□□ 1.54
PABPN1-201ENST00000216727 ZNF66Q6ZN08 573 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 STPG2Q8N412 459 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 FGFRL1Q8N441 504 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 ZNF808Q8N4W9 903 aaPredicted RBP24.69■■□□□ 1.54
PABPN1-201ENST00000216727 COA4Q9NYJ1 87 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 PLA2G2EQ9NZK7 142 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 SPP1P10451 314 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 IRF2P14316 349 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 MUC1P15941 1255 aaPredicted RBP24.69■■□□□ 1.54
PABPN1-201ENST00000216727 BLOC1S1P78537 153 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 TEX36Q5VZQ5 186 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 NARFLQ9H6Q4 476 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 MMP24Q9Y5R2 645 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 VSTM5A8MXK1 200 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 YPEL1O60688 119 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 MED6O75586 246 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 CRYZL1O95825 349 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 CGB3P0DN86 165 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 CGB7P0DN87 165 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 CA7P43166 264 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 EDDM3BP56851 147 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 ZNF266Q14584 549 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 IZUMO4Q1ZYL8 232 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 PXDC1Q5TGL8 231 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 IL34Q6ZMJ4 242 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 ODF3L1Q8IXM7 274 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 YPEL2Q96QA6 119 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 FAM234AQ9H0X4 552 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 ESRP2Q9H6T0 727 aaKnown RBP24.68■■□□□ 1.54
PABPN1-201ENST00000216727 ASCL1P50553 236 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 MORN2Q502X0 79 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 ADAM5Q6NVV9 412 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 HSD17B10Q99714 261 aaKnown RBP24.68■■□□□ 1.54
PABPN1-201ENST00000216727 PARP11Q9NR21 331 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 PSG11Q9UQ72 335 aa24.68■■□□□ 1.54
PABPN1-201ENST00000216727 DSCAMO60469 2012 aa24.67■■□□□ 1.54
PABPN1-201ENST00000216727 MEX3AA1L020 520 aaKnown RBP24.67■■□□□ 1.54
PABPN1-201ENST00000216727 NXPH3O95157 252 aa24.67■■□□□ 1.54
PABPN1-201ENST00000216727 RAB9BQ9NP90 201 aa24.67■■□□□ 1.54
PABPN1-201ENST00000216727 GNG12Q9UBI6 72 aa24.67■■□□□ 1.54
PABPN1-201ENST00000216727 WSB1Q9Y6I7 421 aa24.67■■□□□ 1.54
PABPN1-201ENST00000216727 DEFB108AA8MXU0 73 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 ST8SIA5O15466 376 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 RAMP3O60896 148 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 CLDN1O95832 211 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 LOXL3P58215 753 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 ST6GALNAC3Q8NDV1 305 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 GAFA1Q96PS6 74 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 ZNF665Q9H7R5 613 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 POLEQ07864 2286 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 ATG12O94817 140 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 RPL23AP62750 156 aaKnown RBP24.66■■□□□ 1.54
PABPN1-201ENST00000216727 CCL8P80075 99 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 ZNF788Q6ZQV5 615 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 TCTEX1D2Q8WW35 142 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 CALYQ9NYX4 217 aa24.66■■□□□ 1.54
PABPN1-201ENST00000216727 SPTBN4Q9H254 2564 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 FAM90A26D6RGX4 464 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 P0C879 139 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 BRWD1-AS2P59051 145 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 FAM209AQ5JX71 171 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 NCMAPQ5T1S8 102 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 ZNF295-AS1Q8N0V1 137 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 SPAG16Q8N0X2 631 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 BPIFCQ8NFQ6 507 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 USF3Q68DE3 2245 aa24.65■■□□□ 1.54
PABPN1-201ENST00000216727 LRRC30A6NM36 301 aa24.64■■□□□ 1.54
PABPN1-201ENST00000216727 ATXN7O15265 892 aaPredicted RBP24.64■■□□□ 1.54
PABPN1-201ENST00000216727 SYNGR2O43760 224 aa24.64■■□□□ 1.54
PABPN1-201ENST00000216727 SELLP14151 372 aa24.64■■□□□ 1.54
PABPN1-201ENST00000216727 PJVKQ0ZLH3 352 aa24.64■■□□□ 1.54
PABPN1-201ENST00000216727 DYSFO75923 2080 aa24.64■■□□□ 1.54
PABPN1-201ENST00000216727 TOR1AO14656 332 aa24.64■■□□□ 1.53
PABPN1-201ENST00000216727 DANCRP0C864 163 aa24.64■■□□□ 1.53
PABPN1-201ENST00000216727 OMGP23515 440 aa24.64■■□□□ 1.53
PABPN1-201ENST00000216727 LTC4SQ16873 150 aa24.64■■□□□ 1.53
PABPN1-201ENST00000216727 BTNL3Q6UXE8 466 aa24.64■■□□□ 1.53
PABPN1-201ENST00000216727 OR5C1Q8NGR4 320 aa24.64■■□□□ 1.53
PABPN1-201ENST00000216727 C17orf98A8MV24 154 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 SHISA9B4DS77 424 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 TLE1Q04724 770 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 CLINT1Q14677 625 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 Q3ZCU0 254 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 FBXL19-AS1Q494R0 122 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 KDF1Q8NAX2 398 aaPredicted RBP24.63■■□□□ 1.53
PABPN1-201ENST00000216727 LAMP3Q9UQV4 416 aa24.63■■□□□ 1.53
PABPN1-201ENST00000216727 ITGB1BP1O14713 200 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 TXNL1O43396 289 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 SCO1O75880 301 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 RAB5CP51148 216 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 BTNL8Q6UX41 500 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 DEFB108BQ8NET1 73 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 LYPD6BQ8NI32 183 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 EGLN1Q9GZT9 426 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 HRH4Q9H3N8 390 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 CST7O76096 145 aa24.62■■□□□ 1.53
PABPN1-201ENST00000216727 GPR12P47775 334 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms