RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PSENENQ9NZ42 101 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 GNG12Q9UBI6 72 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 MUC6Q6W4X9 2439 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 IGLV3-9A0A075B6K5 115 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 IGKV1D-17A0A075B6S4 117 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 IGHV3-43A0A0B4J1X8 118 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ODAMA1E959 279 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 FAM74A7A6NL05 159 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF737O75373 536 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 IGHV3-43DP0DP04 118 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 GZMHP20718 246 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 PAX9P55771 341 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 TAS2R30P59541 319 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 RAB2AP61019 212 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 HTD2P86397 168 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 FAM27E3Q08E93 113 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF816Q0VGE8 651 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-201ENST00000054666 Q3ZCU0 254 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 FAM74A3Q4VXF1 159 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 OR2B11Q5JQS5 317 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF66Q6ZN08 573 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 Q6ZRM9 215 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ASCL5Q7RTU5 278 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 LILRB2Q8N423 598 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 FGFRL1Q8N441 504 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 GCSAMQ8N6F7 178 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 CLRN3Q8NCR9 226 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ITLN1Q8WWA0 313 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 HSD17B10Q99714 261 aaKnown RBP6.91□□□□□ -1.3
VAMP3-201ENST00000054666 SEBOXQ9HB31 216 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-201ENST00000054666 JPT1Q9UK76 154 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 ZFHX4Q86UP3 3567 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 CEP250Q9BV73 2442 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 IGHV3OR15-7A0A075B7D8 119 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 LOC105371267A0A1B0GV96 52 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 BTBD17A6NE02 478 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 CLDN1O95832 211 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 CD40P25942 277 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 FHITP49789 147 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 EDDM3BP56851 147 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 TNFAIP6P98066 277 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-201ENST00000054666 LTC4SQ16873 150 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 BTNL3Q6UXE8 466 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM108Q6UXF1 575 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 GFRALQ6UXV0 394 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 RFESDQ8TAC1 157 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 SCGB1C1Q8TD33 95 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 OR6C3Q9NZP0 311 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 PSG11Q9UQ72 335 aa6.91□□□□□ -1.3
VAMP3-201ENST00000054666 GVINP1Q7Z2Y8 2422 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 KIAA1324LA8MWY0 1029 aaPredicted RBP6.9□□□□□ -1.3
VAMP3-201ENST00000054666 ST8SIA5O15466 376 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 RAMP3O60896 148 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 RBMXL2O75526 392 aaKnown RBP6.9□□□□□ -1.3
VAMP3-201ENST00000054666 S1PR2O95136 353 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 KRASP01116 189 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 IRF2P14316 349 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 GATA4P43694 442 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 GPR12P47775 334 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 TDGF1P3P51864 188 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 UBE2KP61086 200 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 RUNX1Q01196 453 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 TLE4Q04727 773 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 DPPA3Q6W0C5 159 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 SSX8Q7RTT4 187 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 SPACA3Q8IXA5 215 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 ODF3L1Q8IXM7 274 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 CISD2Q8N5K1 135 aaKnown RBP6.9□□□□□ -1.3
VAMP3-201ENST00000054666 CD300LFQ8TDQ1 290 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 MRPL37Q9BZE1 423 aaKnown RBP6.9□□□□□ -1.3
VAMP3-201ENST00000054666 KCNJ16Q9NPI9 418 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 ELOVL5Q9NYP7 299 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 RNF7Q9UBF6 113 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 IL19Q9UHD0 177 aa6.9□□□□□ -1.3
VAMP3-201ENST00000054666 A0A1B0GV50 99 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 MEX3AA1L020 520 aaKnown RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 DEFB108AA8MXU0 73 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 C16orf97H3BN30 126 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 C15orf65H3BRN8 121 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CLDN14O95500 239 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 F12P00748 615 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 HBE1P02100 147 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 METTL15P1P0C7V9 234 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CCKARP32238 428 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 G6PCP35575 357 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 RPL30P62888 115 aaKnown RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 TNFRSF9Q07011 255 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 SPANXN5Q5MJ07 72 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 H2BFWTQ7Z2G1 175 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 DOLPP1Q86YN1 238 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 ZNF561Q8N587 486 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 NUP37Q8NFH4 326 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 C14orf79Q96F83 325 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 C5orf30Q96GV9 206 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 SH3BGRL2Q9UJC5 107 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 ZFHX2Q9C0A1 2572 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CFAP47Q6ZTR5 3102 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 CADP27708 2225 aa6.89□□□□□ -1.31
VAMP3-201ENST00000054666 ZNF292O60281 2723 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms