RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Snu13Q9D0T1 128 aaKnown RBP11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Dnajc4Q9D844 244 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr716Q9EPG6 314 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Syt6Q9R0N8 511 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ramp3Q9WUP1 147 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 SnapinQ9Z266 136 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Heatr1G3X9B1 2143 aaKnown RBP11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Igkv13-85A0A075B666 115 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1291-ps1A0A286YE47 326 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn2r30K7N5W1 852 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn2r47K7N709 852 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 P01882 290 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rab6aP35279 208 aaKnown RBP11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 PilrbQ2YFS2 224 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Zfp955aQ80XR7 545 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 LmlnQ8BMN4 681 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr559Q8VH14 318 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ing5Q9D8Y8 240 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Fgf16Q9ESL8 207 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 NmuQ9QXK8 174 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr455A0A0B4J1M2 317 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm14444A2ARW3 426 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm13769A2ATW2 309 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tmem92B7ZWI3 162 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 H2-Ab1P01921 265 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 P06344 263 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Cyb5aP56395 134 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rab3cP62823 227 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr323Q5NCD0 323 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Slc25a26Q5U680 274 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Taf9bQ6NZA9 249 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Flrt1Q6RKD8 674 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r19Q8R2C7 308 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1301Q8VGE7 312 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Armc10Q9D0L7 306 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tceal6Q9DB24 200 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 B3GNT2Q9Z222 397 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm19410A0A140LJC7 2098 aa11.62□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1039A2ARY0 319 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Muc3E9PWP7 378 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r34G3XA52 309 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r121K7N6J4 314 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn2r66K7N6R9 851 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ndufb11O09111 151 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Mrpl23O35972 146 aaKnown RBP11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 PrkacaP05132 351 aaKnown RBP11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ascl1Q02067 231 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Pif1Q80SX8 650 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Fam76bQ80XP8 339 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Q8BTG6 205 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Fam234bQ8BYI8 624 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r235Q8R297 328 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Pip4p2Q9CZX7 257 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ndufa9Q9DC69 377 aaKnown RBP11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr943Q9EQ92 314 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ppp1r1aQ9ERT9 171 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm2026A2ART4 498 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 SpxD3Z752 116 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ankrd65F6YK91 380 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 NppaP05125 152 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Atf1P81269 269 aaKnown RBP11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gal3st2cQ3ULK5 396 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ldlrad2Q3V0V0 142 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Nkain2Q4PNJ2 208 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Fam117aQ7TNF9 451 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gpr135Q7TQP2 457 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Depp1Q8K2F3 205 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r211Q8R266 298 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Mtfp1Q9CRB8 166 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tmem175Q9CXY1 499 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tomm40lQ9CZR3 308 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 DhdhQ9DBB8 333 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Irak1bp1Q9ESJ7 259 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rcl1Q9JJT0 373 aaKnown RBP11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Angptl4Q9Z1P8 410 aa11.61□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Slc25a53A2AF28 346 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm4787B2RUD9 748 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm11009F7CWA7 138 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Casp16-psI6L890 176 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Hspb1P14602 209 aaKnown RBP11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Dnase2P56542 353 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Arf1P84078 181 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 UqcrhP99028 89 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r236Q05A06 334 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tsr3Q5HZH2 323 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Cdcp2Q8BQH6 427 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Lgi3Q8K406 548 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Myo7bQ99MZ6 2113 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rabl2E9Q9D5 223 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Sc5dO88822 299 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Amy2P00688 508 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Itgb2P11835 771 aaKnown RBP11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Cbr1P48758 277 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rasd2P63032 266 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Bcl2l2P70345 193 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Prr27Q3SYJ2 352 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Spata22Q5SV06 358 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ewsr1Q61545 655 aaKnown RBP11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gpank1Q61858 372 aa11.6□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr804Q7TRH7 314 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 87.1 ms