RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cldn34c4A2ANA3 212 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cops9Q3U898 57 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tmeff1Q6PFE7 372 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 CebpeQ6PZD9 281 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Izumo1rQ9EQF4 244 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 P04213 122 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 AgrpP56473 131 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Nkpd1Q0VF94 599 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Nfam1Q8R4V1 264 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Slc48a1Q9D8M3 146 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr154Q9QY00 318 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Evi2aP20934 223 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vstm2aQ8R0A6 236 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 1700025F22RikQ9D9Y7 111 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm15140A2BEE3 237 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Hoxc11P31313 304 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Chrdl1Q920C1 447 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 SigirrQ9JLZ8 409 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Kcnj10Q9JM63 379 aa14.88□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 SrgnP13609 152 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 S100a8P27005 89 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Masp1P98064 704 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 HeylQ9DBX7 326 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Riox1Q9JJF3 603 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm28171A0A087WQ19 227 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1344Q7TQV3 321 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1201Q8VGF5 307 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cd209aQ91ZX1 238 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Iqcf5Q9DAL7 148 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ceacam15A0A0B4J1L0 234 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 TertO70372 1122 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ptger4P32240 513 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1340Q3KPC7 315 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Smim6Q3U0I6 56 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1265Q8VEZ3 309 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Slc6a1P31648 599 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tex52Q3TTI8 308 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 BC147527Q3V185 167 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 AjubaQ91XC0 547 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Uqcc1Q9CWU6 295 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cml3Q9JIY8 226 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm4565A0A140LJ87 301 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm6176J3QK59 301 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm4567Q3UTA8 301 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 HaaoQ78JT3 286 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr995Q8VF74 315 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 SordQ64442 357 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Rbfox2Q8BP71 449 aaKnown RBP14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr362Q8VGV7 317 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 GmppaQ922H4 420 aa14.87□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Stpg3A2RSX4 306 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Hist1h1dP43277 221 aaKnown RBP14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 4930474N05RikQ8BVR5 218 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1393Q8VFA7 311 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Bola1Q9D8S9 137 aaKnown RBP14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Prpf8Q99PV0 2335 aaKnown RBP14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 BsgP18572 389 aaKnown RBP14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 A730049H05RikQ8C940 139 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ntng1Q8R4G0 539 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 FcmrA1KXC4 422 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Sh2d1bO35324 132 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Agpat2Q8K3K7 278 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr60Q8VGL4 311 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1242Q8VGM6 306 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Slc25a22Q9D6M3 323 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vma21-psA0A140T8R2 101 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1179A2AUS6 307 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm20422E9PUR3 255 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 ArsaP50428 506 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr527Q7TRT9 305 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr495Q8VF12 330 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Q9CRW3 126 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Lypd6bQ9D7F2 191 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Spry1Q9QXV9 313 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Rbm24D3Z4I3 236 aaKnown RBP14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Hist1h1aP43275 213 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Rnf223Q3UV31 285 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Zfp874bQ7M6X2 447 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1042Q7TR81 313 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Aurkaip1Q9DCJ7 200 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cd3eP22646 189 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gnb2P62880 340 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cks1brtQ3UNC9 96 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cd55Q61475 390 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Hand1Q64279 216 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Josd1Q9DBJ6 202 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tmem238lA0A1B0GS74 79 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Igsf21Q7TNR6 468 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 C1rbQ8CFG9 706 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Nit1Q8VDK1 323 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr828Q8VFM8 312 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1447Q8VFX3 309 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm12728V9GX31 77 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1445Q8VFW9 314 aa14.86□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Lclat1Q3UN02 376 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Pafah1b3Q61205 232 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ly6eQ64253 130 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ifna14Q810G3 189 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr507Q8VG13 316 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Fam98cE9PYD1 344 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms