RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sgo1Q9CXH7 517 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Slc50a1Q9CXK4 221 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Fam210bQ9D8B6 190 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Crybb1Q9WVJ5 250 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1158A2BHP7 313 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Slc18b1D3Z5L6 459 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr62L7MU75 315 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ly6aP05533 134 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Klhdc2Q4G5Y1 406 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Wbp1lQ8BGW2 348 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1038Q8VGS1 319 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Clec2dQ91V08 207 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Abhd12Q99LR1 398 aaKnown RBP9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Htra3Q9D236 459 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Q9DAE8 263 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Kcne3Q9WTW2 103 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Actl6aQ9Z2N8 429 aaKnown RBP9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tarm1B6A8R8 288 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr194L7N1Y8 306 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Wdr1O88342 606 aaKnown RBP9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cxcl10P17515 98 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gdf9Q07105 441 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 F13bQ07968 669 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rph3alQ768S4 302 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1131Q7TR45 309 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 H2-M10.6Q85ZW5 330 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Henmt1Q8CAE2 395 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr469Q8VF66 314 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mus81Q91ZJ0 551 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zfp707F6QUN2 391 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm2663F6R7E8 247 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 TaglnP37804 201 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rab42Q0PD08 215 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Prss48Q14B25 312 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mfsd4b3Q3UN21 355 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Nkain2Q4PNJ2 208 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tspan7Q62283 249 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr335-psQ7TRY6 312 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 F12Q80YC5 597 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 LgalslQ8VED9 172 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1420Q8VF55 309 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 GhitmQ91VC9 346 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem123Q91Z22 195 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gjc3Q921C1 269 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rab27bQ99P58 218 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 1810009J06RikQ9CPN7 247 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 PaplnQ9EPX2 1280 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr943Q9EQ92 314 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 B3GNT2Q9Z222 397 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Igf2rQ07113 2483 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Trpm7Q923J1 1863 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Vmn1r180B9EK86 305 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 IghgP01863 330 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm9125P0DMR6 365 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 P2ry1P49650 373 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Lhfpl5Q4KL25 219 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Fam57aQ5ND56 257 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Dhrs13Q5SS80 376 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ctf1Q60753 203 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ewsr1Q61545 655 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ppp1r14dQ7TT52 146 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Scrt2Q8BTH6 311 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 SrrdQ8K2M3 249 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rep15Q9D7T1 230 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem239Q9DA47 151 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ergic1Q9DC16 290 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mllt1Q9ERL0 547 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Isg20Q9JL16 300 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Klrc3Q9QXN7 221 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Fbxo15Q9QZN0 433 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 4930435E12RikA6X8Z9 381 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 SdcbpO08992 299 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Lyl1P27792 278 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr90Q0VEL5 310 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cmc2Q8K199 79 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Adipor1Q91VH1 375 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 NanpQ9CPT3 248 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 NpffQ9WVA8 114 aa9.09□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Scgb1b29D2XZ31 93 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Scgb1b20E9PWZ2 93 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Zfp760E9QAF5 666 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20918J3QN17 227 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 GlulP15105 373 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1340Q3KPC7 315 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Q9CYS6 286 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fkbp11Q9D1M7 201 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 4933402D24RikQ9D4D3 167 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mmp17Q9R0S3 578 aa9.09□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Btbd35f23A0A0R4J2B9 498 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1223A0A1L1SU13 311 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm10840Q3V2K9 103 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Slc7a15Q50E62 488 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Adora3Q61618 319 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ell3Q80VR2 395 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mettl27Q8BGM4 238 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Nabp1Q8BGW5 198 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Lrrtm1Q8K377 522 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mid1ip1Q9CQ20 182 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mansc1Q9CR33 414 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm17657E9PWY5 170 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 125.2 ms