RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ighv9-1A0A0B4J1P3 117 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Gm44596A0A0N4SVA0 210 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr547E9PXN3 311 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 IghgP01863 330 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Cln5Q3UMW8 341 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Thap4Q6P3Z3 569 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Shisa7Q8C3Q5 558 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr341Q8VGK9 313 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Uqcc1Q9CWU6 295 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Slc25a22Q9D6M3 323 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr485A0A140LJF5 317 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Gsx2P31316 305 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Xkr7Q5GH64 580 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Mef2aQ60929 498 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olig3Q6PFG8 273 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr843Q7TRG4 313 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Pld4Q8BG07 503 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Flywch2Q9CQE9 139 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Tubd1Q9R1K7 455 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Tcf21O35437 179 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Snai2P97469 269 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Lcn12Q6JVL5 193 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Onecut2Q6XBJ3 505 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr924Q7TRB8 308 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Samd10Q7TST3 202 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Rbfox2Q8BP71 449 aaKnown RBP12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr982Q8VGB3 321 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Jmjd6Q9ERI5 403 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 P01798 113 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Slc19a1P41438 512 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Hoxd8P23463 289 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Evx2P49749 475 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 CtsjQ9R014 334 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Zfp433A0A0J9YUD4 600 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Gm32687A0A1W2P6H7 600 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Tbxa2rP30987 341 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Irs1P35569 1233 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 CfiQ61129 603 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Taf1Q80UV9 1891 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 F2rl2O08675 369 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Cpeb2Q812E0 521 aaKnown RBP12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 MrgpreQ91ZB7 310 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Cmtm2bQ9DAC0 210 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Wdr83Q9DAJ4 315 aaKnown RBP12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Cml3Q9JIY8 226 aa12.54□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr785A0A0N4SVC3 312 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 G530012D18RikJ3QK25 139 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 PkibQ04758 92 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 March5Q3KNM2 278 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr1451Q8VFX5 310 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Gm31371A0A1D5RM70 265 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Pusl1A2ADA5 291 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Prr23a2D3YWX5 253 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Tbx6P70327 436 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Kazald1Q8BJ66 313 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Dusp7Q91Z46 422 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Dhrs4Q99LB2 279 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Loxhd1C8YR32 2068 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Trav23A0A0G2JG17 115 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Sult2a5K7N6K9 285 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Znf106O88466 1888 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Pitpnc1Q8K4R4 332 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Atp6v1fQ9D1K2 119 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Cacna1aP97445 2368 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Fam170bE9PXT9 378 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 PilrbQ2YFS2 224 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Nfam1Q8R4V1 264 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Prss23Q9D6X6 382 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr1335B2RVY8 335 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Ndufb11O09111 151 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Best1O88870 551 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 KhsrpQ3U0V1 748 aaKnown RBP12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr140Q60878 302 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr504Q7TRU7 318 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Chrdl2Q8VEA6 426 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr1272Q8VGN8 308 aa12.53□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Plxna1P70206 1894 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Ctxnd2A0A1B0GQX3 59 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Hoxa4P06798 285 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 PimregQ8BFY7 231 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 MyadmO35682 320 aaKnown RBP12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Pip5k1aP70182 546 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 G0s2Q61585 103 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Ly6eQ64253 130 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Fam72aQ8BFZ8 149 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Dlk2Q8K1E3 382 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr1143Q8VEU8 314 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Vmn1r171Q9EPS6 316 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Togaram1Q6A070 1776 aaKnown RBP12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Gm28171A0A087WQ19 227 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Gm4884E9PVP9 694 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Slc16a7O70451 484 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Olfr1026Q7TR90 307 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Hs3st3a1Q8BKN6 393 aa12.52□□□□□ -0.4
Col5a1-201ENSMUST00000028280 Defa3P28310 93 aa12.52□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Defa10P50708 93 aa12.52□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Defa15P50713 93 aa12.52□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cfhr1Q61406 343 aa12.52□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Zfp975Q6NVD6 525 aa12.52□□□□□ -0.41
Col5a1-201ENSMUST00000028280 H1fooQ8VIK3 304 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms