RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 NEU1Q99519 415 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 LOXL2Q9Y4K0 774 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 CXorf65A6NEN9 183 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 RAB2AP61019 212 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 Q6P435 159 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 APH1AQ96BI3 265 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 PLK3Q9H4B4 646 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 PSENENQ9NZ42 101 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
PHGDH-233ENST00000642021 ESPL1Q14674 2120 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 ANKRD30BLA7E2S9 258 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-233ENST00000642021 DEGS1O15121 323 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 MBP02144 154 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-233ENST00000642021 GNG3P63215 75 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 HNF4GQ14541 408 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 ZNF787Q6DD87 383 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 FAM173AQ9BQD7 235 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 OR51I2Q9H344 312 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 SIRT7Q9NRC8 400 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 PRSS50Q9UI38 385 aa11.71□□□□□ -0.53
PHGDH-233ENST00000642021 PRRC2CQ9Y520 2896 aaKnown RBP11.71□□□□□ -0.53
PHGDH-233ENST00000642021 SOD3P08294 240 aa11.71□□□□□ -0.54
PHGDH-233ENST00000642021 BCL2P10415 239 aa11.71□□□□□ -0.54
PHGDH-233ENST00000642021 SLC25A6P12236 298 aa11.71□□□□□ -0.54
PHGDH-233ENST00000642021 DTD1Q8TEA8 209 aa11.71□□□□□ -0.54
PHGDH-233ENST00000642021 CISD1Q9NZ45 108 aaKnown RBP11.71□□□□□ -0.54
PHGDH-233ENST00000642021 ZDBF2Q9HCK1 2354 aa11.71□□□□□ -0.54
PHGDH-233ENST00000642021 SIRPB1O00241 398 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 SYNGR4O95473 234 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 S100GP29377 79 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 LPAL2Q16609 132 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 WDR86Q86TI4 376 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 SCGB1C1Q8TD33 95 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 RCC1LQ96I51 464 aaKnown RBP11.7□□□□□ -0.54
PHGDH-233ENST00000642021 TTTY12Q9BZ98 90 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 GPR61Q9BZJ8 451 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 TCAPO15273 167 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 WDR1O75083 606 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 ARR3P36575 388 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 TLE1Q04724 770 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 PLP2Q04941 152 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 TCEAL6Q6IPX3 200 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 LINC00596Q86U02 117 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 MBD3L1Q8WWY6 194 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 FRZBQ92765 325 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 OR4C12Q96R67 309 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 C12orf49Q9H741 205 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 GAR1Q9NY12 217 aaKnown RBP11.7□□□□□ -0.54
PHGDH-233ENST00000642021 MPC1Q9Y5U8 109 aa11.7□□□□□ -0.54
PHGDH-233ENST00000642021 DIDO1Q9BTC0 2240 aaKnown RBP11.7□□□□□ -0.54
PHGDH-233ENST00000642021 CER1O95813 267 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 MT-CO3P00414 261 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 SPANXN5Q5MJ07 72 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 PEAR1Q5VY43 1037 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-233ENST00000642021 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-233ENST00000642021 LINC00696Q6ZRV3 163 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 TMEM251Q8N6I4 163 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 OR10D4PQ8NGN7 298 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
PHGDH-233ENST00000642021 RBM7Q9Y580 266 aaKnown RBP11.69□□□□□ -0.54
PHGDH-233ENST00000642021 NBEAQ8NFP9 2946 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 IL18BPO95998 194 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-233ENST00000642021 OR1C1Q15619 314 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 C4orf17Q53FE4 359 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 FAM180AQ6UWF9 173 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 FAM210BQ96KR6 192 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 KIAA2026Q5HYC2 2103 aa11.69□□□□□ -0.54
PHGDH-233ENST00000642021 OR5B21A6NL26 309 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 OR2H2O95918 312 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 IGKV1D-33P01593 117 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 IGKV1-33P01594 117 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 SELEP16581 610 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 ELLP55199 621 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-233ENST00000642021 SDF2L1Q9HCN8 221 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 TRAPPC2LQ9UL33 140 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 KCNS2Q9ULS6 477 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 APLNRP35414 380 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 MDH2P40926 338 aaKnown RBP11.68□□□□□ -0.54
PHGDH-233ENST00000642021 HOXA4Q00056 320 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-233ENST00000642021 ABHD17BQ5VST6 288 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 MEGF10Q96KG7 1140 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 SPRY4Q9C004 299 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
PHGDH-233ENST00000642021 CHD3Q12873 2000 aaKnown RBP11.68□□□□□ -0.54
PHGDH-233ENST00000642021 C9orf172C9J069 976 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms