RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 TMEM56Q96MV1 263 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 ZNF471Q9BX82 626 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 REG4Q9BYZ8 158 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 CHODLQ9H9P2 273 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 SEBOXQ9HB31 216 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 CYTL1Q9NRR1 136 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 MBNL3Q9NUK0 354 aaKnown RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 OR5AC2Q9NZP5 309 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4Q9UBX2 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 WIPI2Q9Y4P8 454 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 TMEM56-RWDD3S4R434 201 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 C3orf85A0A1B0GTC6 90 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 MFSD2BA6NFX1 497 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 F5H0A9 414 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-224ENST00000641711 H0YL77 283 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 HSPB6O14558 160 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 TAAR5O14804 337 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 PHF1O43189 567 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-224ENST00000641711 DEDDO75618 318 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 NXPH2O95156 264 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 FSTL3O95633 263 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 TPT1P13693 172 aaKnown RBP8.56□□□□□ -1.04
PHGDH-224ENST00000641711 DAOP14920 347 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 HMGN3Q15651 99 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 SP6Q3SY56 376 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
PHGDH-224ENST00000641711 OR11L1Q8NGX0 322 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 LRRC20Q8TCA0 184 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 PCNPQ8WW12 178 aaKnown RBP8.56□□□□□ -1.04
PHGDH-224ENST00000641711 IL22RA2Q969J5 263 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 PIMREGQ9BSJ6 248 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 SLC5A7Q9GZV3 580 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 TMEM222Q9H0R3 208 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 DNTTIP1Q9H147 329 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 MSL2Q9HCI7 577 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 GSKIPQ9P0R6 139 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 GLS2Q9UI32 602 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 OR2W1Q9Y3N9 320 aa8.56□□□□□ -1.04
PHGDH-224ENST00000641711 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 IGKV1D-13A0A0B4J2D9 117 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 IGHV1-69-2A0A0G2JMI3 117 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 MSGN1A6NI15 193 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 H0Y980 276 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-224ENST00000641711 BET1O15155 118 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 SHOXO15266 292 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 SPRY3O43610 288 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 CDS2O95674 445 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 HAND1O96004 215 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 GRPP07492 148 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 IGKV1-13P0DP09 117 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 HKR1P10072 659 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 UCP1P25874 307 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 TMEM33P57088 247 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 EIF5AP63241 154 aaKnown RBP8.55□□□□□ -1.04
PHGDH-224ENST00000641711 CCL8P80075 99 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 PAX5Q02548 391 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 SMCO1Q147U7 214 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 CLEC12BQ2HXU8 276 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 TOR2AQ5JU69 321 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 SLC35E4Q6ICL7 350 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 WDR82Q6UXN9 313 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 LYZL2Q7Z4W2 148 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 HSD17B13Q7Z5P4 300 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-224ENST00000641711 TBC1D26Q86UD7 250 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 CMTM1Q8IZ96 169 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 C1orf87Q8N0U7 546 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 BVESQ8NE79 360 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 OR2Z1Q8NG97 314 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 OR10Z1Q8NGY1 313 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 OR10J5Q8NHC4 309 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 LHFPL5Q8TAF8 219 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 PLPPR1Q8TBJ4 325 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 Q8TCH9 128 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 FAM168AQ92567 244 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 RBPMSQ93062 196 aaKnown RBP8.55□□□□□ -1.04
PHGDH-224ENST00000641711 ABHD14BQ96IU4 210 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 KIRREL1Q96J84 757 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 MEGF10Q96KG7 1140 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 OR2V2Q96R30 315 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 TP53RKQ96S44 253 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 PLEKHA2Q9HB19 425 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 SDHAF2Q9NX18 166 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 PFDN2Q9UHV9 154 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 MED13LQ71F56 2210 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 ACANP16112 2415 aa8.55□□□□□ -1.04
PHGDH-224ENST00000641711 TLN2Q9Y4G6 2542 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 ABCA1O95477 2261 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 TMEM30CPA0ZSE6 113 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 LRRC30A6NM36 301 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 E5RGE8 158 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 K7EPK0 472 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 SIRPB1O00241 398 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 NDUFS7O75251 213 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 GAPDHP04406 335 aaKnown RBP8.54□□□□□ -1.04
PHGDH-224ENST00000641711 RCC1P18754 421 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-224ENST00000641711 S100GP29377 79 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 CFHR2P36980 270 aa8.54□□□□□ -1.04
PHGDH-224ENST00000641711 S100A10P60903 97 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms