RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 LMO1P25800 156 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 CBX5P45973 191 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 EDDM3BP56851 147 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 ACTBP60709 375 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 AESQ08117 197 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 TMEM95Q3KNT9 176 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 KRBOX4Q5JUW0 171 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 C11orf88Q6PI97 169 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 Q6ZS46 218 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 LHFPL4Q7Z7J7 247 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 TMEM219Q86XT9 240 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 DYNAPQ8N1N2 210 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 OR5D13Q8NGL4 314 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 PLPPR1Q8TBJ4 325 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 WIPF2Q8TF74 440 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-222ENST00000641587 MAFIPQ8WZ33 124 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 SDHCQ99643 169 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-222ENST00000641587 THAP7Q9BT49 309 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-222ENST00000641587 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 FAM234AQ9H0X4 552 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 SEBOXQ9HB31 216 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-222ENST00000641587 C19orf12Q9NSK7 152 aa8.07□□□□□ -1.12
PHGDH-222ENST00000641587 MEIKINA0A087WXM9 373 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 FUOMA2VDF0 154 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 K7N7A8 449 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 MGST3O14880 152 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF737O75373 536 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 UPK1BO75841 260 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 FCGR3AP08637 254 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 IL7P13232 177 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 RCVRNP35243 200 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 GDNFP39905 211 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 GLP1RP43220 463 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 KCNJ3P48549 501 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 RAB13P51153 203 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 BAK1Q16611 211 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 NDUFA11Q86Y39 141 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 TPRX1Q8N7U7 411 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 OR4K15Q8NH41 348 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 GPX8Q8TED1 209 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 CCDC107Q8WV48 283 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 ST6GALNAC5Q9BVH7 336 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 RIMS4Q9H426 269 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-222ENST00000641587 RAB18Q9NP72 206 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 KLK11Q9UBX7 282 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF230Q9UIE0 474 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-222ENST00000641587 KIF25Q9UIL4 384 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 TRAPPC2LQ9UL33 140 aa8.06□□□□□ -1.12
PHGDH-222ENST00000641587 WI2-2373I1.2A0A1W2PRP0 233 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 MEX3AA1L020 520 aaKnown RBP8.05□□□□□ -1.12
PHGDH-222ENST00000641587 LANCL1O43813 399 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 CSN2P05814 226 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 GSTT2BP0CG30 244 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 CCL3L1P16619 93 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 DTYMKP23919 212 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 GLIPR1P48060 266 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 AP3S2P59780 193 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 ARPC4P59998 168 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 DCTN2Q13561 401 aaKnown RBP8.05□□□□□ -1.12
PHGDH-222ENST00000641587 LDLRAD2Q5SZI1 272 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 RSBN1Q5VWQ0 802 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF782Q6ZMW2 699 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF497Q6ZNH5 498 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 MOB1BQ7L9L4 216 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 TOMM5Q8N4H5 51 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 C11orf42Q8N5U0 333 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 GVQW1Q8N7I0 195 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 OR4F17Q8NGA8 305 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 MRPL30Q8TCC3 161 aaKnown RBP8.05□□□□□ -1.12
PHGDH-222ENST00000641587 TRIM63Q969Q1 353 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 COQ2Q96H96 371 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 OR4F4Q96R69 305 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF286AQ9HBT8 521 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 KCNIP1Q9NZI2 227 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 MTFP1Q9UDX5 166 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 DSCAML1Q8TD84 2053 aa8.05□□□□□ -1.12
PHGDH-222ENST00000641587 TRAV39A0A0B4J263 110 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 ODAMA1E959 279 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF736B4DX44 427 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-222ENST00000641587 ORC5O43913 435 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 NAPSAO96009 420 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 MT-ND4P03905 459 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 CD33P20138 364 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 HLA-DMAP28067 261 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 P2RX3P56373 397 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 DEFA1P59665 94 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 DEFA3P59666 94 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 KRTAP10-11P60412 298 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 SSBP1Q04837 148 aaKnown RBP8.04□□□□□ -1.12
PHGDH-222ENST00000641587 ZNF273Q14593 569 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 AANATQ16613 207 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 OR52W1Q6IF63 320 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 HOGA1Q86XE5 327 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 Q8N2B8 174 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 PRR18Q8N4B5 295 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 BEST4Q8NFU0 473 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 OR5H2Q8NGV7 314 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 MRGPRDQ8TDS7 321 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 OCSTAMPQ9BR26 566 aa8.04□□□□□ -1.12
PHGDH-222ENST00000641587 WNT10AQ9GZT5 417 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms