RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 LPCAT3Q6P1A2 487 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 C11orf88Q6PI97 169 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 TOMM40LQ969M1 308 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 YPEL2Q96QA6 119 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 S1PR3Q99500 378 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 MS4A7Q9GZW8 240 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-218ENST00000641491 SIRPDQ9H106 197 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 OR1A1Q9P1Q5 309 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 ANAPC10Q9UM13 185 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 RBMX2Q9Y388 322 aaKnown RBP10.62□□□□□ -0.71
PHGDH-218ENST00000641491 TRBV6-7A0A0A0MS04 114 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 UPK1BO75841 260 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 IGHV3-7P01780 117 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 EPHA1P21709 976 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 RFX2P48378 723 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 UBE2E1P51965 193 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 PAX2Q02962 417 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 CBX3Q13185 183 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 DYRK1AQ13627 763 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 CMTM1Q8IZ96 169 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 LYG1Q8N1E2 194 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 ENKURQ8TC29 256 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 LEAP2Q969E1 77 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 RPEQ96AT9 228 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 MMP28Q9H239 520 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 GHITMQ9H3K2 345 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 LINC00574Q9H8X3 128 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 PIPOXQ9P0Z9 390 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 PSG11Q9UQ72 335 aa10.61□□□□□ -0.71
PHGDH-218ENST00000641491 C14orf166Q9Y224 244 aaKnown RBP10.61□□□□□ -0.71
PHGDH-218ENST00000641491 A0A1W2PRD5 423 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 A0A1W2PRF3 423 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 A0A1W2PRM7 423 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 LEUTXA8MZ59 168 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 J3QR06 171 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 PPYP01298 95 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 OR8U9P0C7N5 309 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 HTR1DP28221 377 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 DLX6P56179 175 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 BPIFB3P59826 476 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 KLRD1Q13241 179 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 GNMTQ14749 295 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 BAK1Q16611 211 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 MORN2Q502X0 79 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 PLA1AQ53H76 456 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 CCDC144NLQ6NUI1 221 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 OVCH2Q7RTZ1 564 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 OR4C16Q8NGL9 310 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 OR8U1Q8NH10 309 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 SECTM1Q8WVN6 248 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 TRIM63Q969Q1 353 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 UPRTQ96BW1 309 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 MDFIQ99750 246 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 TMPRSS13Q9BYE2 586 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-218ENST00000641491 OR2D2Q9H210 308 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 UNKLQ9H9P5 680 aaKnown RBP10.6□□□□□ -0.71
PHGDH-218ENST00000641491 OR2W1Q9Y3N9 320 aa10.6□□□□□ -0.71
PHGDH-218ENST00000641491 TBL2Q9Y4P3 447 aaKnown RBP10.6□□□□□ -0.71
PHGDH-218ENST00000641491 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 IGKV1D-8A0A087WSZ0 117 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 IGHV1-69DA0A0B4J2H0 117 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 BTBD17A6NE02 478 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 RAB29O14966 203 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 NPFFO15130 113 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 ST8SIA5O15466 376 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 TXNL1O43396 289 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 LANCL1O43813 399 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 MMP23AO75900 390 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 IGHV1-69P01742 117 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 CD74P04233 296 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 CGB3P0DN86 165 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 CGB7P0DN87 165 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 AADACP22760 399 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 DCTN2Q13561 401 aaKnown RBP10.59□□□□□ -0.71
PHGDH-218ENST00000641491 KLF9Q13886 244 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-218ENST00000641491 MIDNQ504T8 468 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 RBMS3Q6XE24 437 aaKnown RBP10.59□□□□□ -0.71
PHGDH-218ENST00000641491 IDO2Q6ZQW0 420 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 H1FOOQ8IZA3 346 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-218ENST00000641491 SLC38A6Q8IZM9 456 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 Q8N7P7 452 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 POC5Q8NA72 575 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 BEND2Q8NDZ0 799 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 OR56B4Q8NH76 319 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 ZFAND1Q8TCF1 268 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 GIMAP1Q8WWP7 306 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 TBX15Q96SF7 602 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 SLC5A7Q9GZV3 580 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 HRASLSQ9HDD0 168 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 PALMDQ9NP74 551 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 NUP50Q9UKX7 468 aa10.59□□□□□ -0.71
PHGDH-218ENST00000641491 FLNAP21333 2647 aaKnown RBP10.58□□□□□ -0.72
PHGDH-218ENST00000641491 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 A0A087X0M5 115 aa10.58□□□□□ -0.72
PHGDH-218ENST00000641491 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms