RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SPINT2O43291 252 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 OR2F2O95006 317 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 OR2F1Q13607 317 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 TPRX1Q8N7U7 411 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 INO80EQ8NBZ0 244 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-216ENST00000641375 ZNRF1Q8ND25 227 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 OR13A1Q8NGR1 328 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 OR1L1Q8NH94 360 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 CISD1Q9NZ45 108 aaKnown RBP13.72□□□□□ -0.21
PHGDH-216ENST00000641375 GSKIPQ9P0R6 139 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 MBD2Q9UBB5 411 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 ANKHD1Q8IWZ3 2542 aaKnown RBP13.72□□□□□ -0.21
PHGDH-216ENST00000641375 RELNP78509 3460 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 ODAMA1E959 279 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 PGLYRP1O75594 196 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-216ENST00000641375 MEOX2P50222 304 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 IL15RAQ13261 267 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 FAM201AQ5SY85 155 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 NEUROG1Q92886 237 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 TMEM56Q96MV1 263 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 ZNF665Q9H7R5 613 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 TMEM56-RWDD3S4R434 201 aa13.72□□□□□ -0.21
PHGDH-216ENST00000641375 H0Y980 276 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 RP2O75695 350 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 SNAPINO95295 136 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 NMBP08949 121 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 WNT2P09544 360 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 RPL35P42766 123 aaKnown RBP13.71□□□□□ -0.21
PHGDH-216ENST00000641375 TFF3Q07654 80 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 CR1LQ2VPA4 569 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 MEX3BQ6ZN04 569 aaKnown RBP13.71□□□□□ -0.21
PHGDH-216ENST00000641375 ACOT7LQ6ZUV0 252 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 LYZL2Q7Z4W2 148 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 ZCCHC24Q8N2G6 241 aaKnown RBP13.71□□□□□ -0.21
PHGDH-216ENST00000641375 ARL11Q969Q4 196 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 FAM234AQ9H0X4 552 aa13.71□□□□□ -0.21
PHGDH-216ENST00000641375 DUXBA0A1W2PPF3 345 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 F2RP25116 425 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 UCP1P25874 307 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 AKR1D1P51857 326 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 HTD2P86397 168 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 PRSS54Q6PEW0 395 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 ZNF695Q8IW36 515 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 OR6C3Q9NZP0 311 aa13.71□□□□□ -0.22
PHGDH-216ENST00000641375 HCFC1P51610 2035 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 TRAV38-1A0A0B4J264 116 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 CDS2O95674 445 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 OR8U9P0C7N5 309 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 LYL1P12980 280 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 SSTR5P35346 364 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 RAB32Q13637 225 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 C4orf17Q53FE4 359 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 TMEM268Q5VZI3 342 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 ZNF788Q6ZQV5 615 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 STPG2Q8N412 459 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 ZNF808Q8N4W9 903 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-216ENST00000641375 KCNRGQ8N5I3 272 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 SLC35G3Q8N808 338 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 OR8U1Q8NH10 309 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 RAB9BQ9NP90 201 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 OR2S2Q9NQN1 319 aa13.7□□□□□ -0.22
PHGDH-216ENST00000641375 RAI1Q7Z5J4 1906 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-216ENST00000641375 C15orf65H3BRN8 121 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 TNFSF12O43508 249 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 PLAUP00749 431 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 EDDM3BP56851 147 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 MST1LQ2TV78 715 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 ZBTB34Q8NCN2 500 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 DEFB108BQ8NET1 73 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 DCUN1D4Q92564 292 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 IL22RA2Q969J5 263 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 CXorf58Q96LI9 332 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 RNF126Q9BV68 326 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 ZFP57Q9NU63 452 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 KCNS2Q9ULS6 477 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 RNF222A6NCQ9 220 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 H7C2Y5 167 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 SIAH2O43255 324 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 IGLV2-14P01704 120 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-216ENST00000641375 ZNF645Q8N7E2 425 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 OR52L2PQ8NGH6 319 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 FAM216AQ8WUB2 273 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 C14orf79Q96F83 325 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 GAFA1Q96PS6 74 aa13.69□□□□□ -0.22
PHGDH-216ENST00000641375 ARFGEF3Q5TH69 2177 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 NKX6-3A6NJ46 265 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 TMEM178BH3BS89 294 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 LGALS8O00214 317 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 GYPAP02724 150 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 S100A10P60903 97 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SMCO1Q147U7 214 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 MSMO1Q15800 293 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 TGIF2LYQ8IUE0 185 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 MUC15Q8N387 334 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 SCARB1Q8WTV0 552 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 TANC2Q9HCD6 1990 aa13.68□□□□□ -0.22
PHGDH-216ENST00000641375 PKDREJQ9NTG1 2253 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms