RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ANKRD60Q9BZ19 345 aa13□□□□□ -0.33
PHGDH-213ENST00000641272 OR51J1Q9H342 316 aa13□□□□□ -0.33
PHGDH-213ENST00000641272 ISYNA1Q9NPH2 558 aa13□□□□□ -0.33
PHGDH-213ENST00000641272 JPT1Q9UK76 154 aa13□□□□□ -0.33
PHGDH-213ENST00000641272 ZNF256Q9Y2P7 627 aaPredicted RBP13□□□□□ -0.33
PHGDH-213ENST00000641272 A3GALT2U3KPV4 340 aa13□□□□□ -0.33
PHGDH-213ENST00000641272 HUWE1Q7Z6Z7 4374 aaKnown RBP13□□□□□ -0.33
PHGDH-213ENST00000641272 IGHV7-81A0A0B4J1V7 117 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 FAM90A10PA6NDY2 464 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 FAM90A7PA6NKC0 464 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 FAM90A23PA8MXZ1 464 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 ST8SIA5O15466 376 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 PPIFP30405 207 aaKnown RBP12.99□□□□□ -0.33
PHGDH-213ENST00000641272 FAM27D1Q5T7N8 215 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 TMEM65Q6PI78 240 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 NKAIN3Q8N8D7 197 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 IL1F10Q8WWZ1 152 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 SULT4A1Q9BR01 284 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
PHGDH-213ENST00000641272 TRAV41A0A0B4J266 112 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 EFCAB10A6NFE3 127 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 CA11O75493 328 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 GNAO1P09471 354 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 OR8U8P0C7N1 319 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 WNT4P56705 351 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 ZNF616Q08AN1 781 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 C5orf64Q2M2E5 130 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 C6orf141Q5SZD1 244 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 TTC23Q5W5X9 447 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 LAIR2Q6ISS4 152 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 GLDNQ6ZMI3 551 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-213ENST00000641272 ZNF833PQ6ZTB9 187 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 C6orf201Q7Z4U5 140 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 DHRSXQ8N5I4 330 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 ZNF491Q8N8L2 437 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 OR2AK2Q8NG84 335 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 OR1N2Q8NGR9 330 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 SETD6Q8TBK2 473 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 NICN1Q9BSH3 213 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 PARP12Q9H0J9 701 aaKnown RBP12.98□□□□□ -0.33
PHGDH-213ENST00000641272 IFI27L2Q9H2X8 130 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 ZNF580Q9UK33 172 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 VSIG4Q9Y279 399 aa12.98□□□□□ -0.33
PHGDH-213ENST00000641272 A0A1W2PN81 502 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 I3L521 148 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-213ENST00000641272 CHATP28329 748 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 CHRNA7P36544 502 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 SLURP1P55000 103 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 KIAA0141Q14154 515 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-213ENST00000641272 HMGN3Q15651 99 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 RPL39P5Q59GN2 51 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 RBM48Q5RL73 367 aaKnown RBP12.97□□□□□ -0.33
PHGDH-213ENST00000641272 ABHD5Q8WTS1 349 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 UBE2E2Q96LR5 201 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 CST11Q9H112 138 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 CHMP1AQ9HD42 196 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-213ENST00000641272 KIAA1456Q9P272 454 aa12.97□□□□□ -0.33
PHGDH-213ENST00000641272 SAP30O75446 220 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 IGLV1-40P01703 118 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-213ENST00000641272 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-213ENST00000641272 STEAP3Q658P3 488 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 CDH26Q8IXH8 852 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 C8orf59Q8N0T1 100 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-213ENST00000641272 BPIFB6Q8NFQ5 453 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 GALMQ96C23 342 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 NEDD4LQ96PU5 975 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 UQCC2Q9BRT2 126 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 FAAP24Q9BTP7 215 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 TMEM59Q9BXS4 323 aa12.96□□□□□ -0.33
PHGDH-213ENST00000641272 SOX15O60248 233 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 YPEL1O60688 119 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 RGS11O94810 467 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 NDUFA3O95167 84 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 GLAP06280 429 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 SNRPBP14678 240 aaKnown RBP12.95□□□□□ -0.34
PHGDH-213ENST00000641272 RAB9AP51151 201 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 HTD2P86397 168 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 PLGLAQ15195 96 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 RCN1Q15293 331 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 SVOPQ8N4V2 548 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 YPEL2Q96QA6 119 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-213ENST00000641272 TMED9Q9BVK6 235 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 CNOT2Q9NZN8 540 aaKnown RBP12.95□□□□□ -0.34
PHGDH-213ENST00000641272 ABRACLQ9P1F3 81 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 PSORS1C1Q9UIG5 152 aa12.95□□□□□ -0.34
PHGDH-213ENST00000641272 STAB2Q8WWQ8 2551 aa12.94□□□□□ -0.34
PHGDH-213ENST00000641272 IGHV4OR15-8A0A075B7B6 117 aa12.94□□□□□ -0.34
PHGDH-213ENST00000641272 A0A087WW49 117 aa12.94□□□□□ -0.34
PHGDH-213ENST00000641272 EBAG9O00559 213 aa12.94□□□□□ -0.34
PHGDH-213ENST00000641272 OVOL1O14753 267 aa12.94□□□□□ -0.34
PHGDH-213ENST00000641272 HTR2CP28335 458 aa12.94□□□□□ -0.34
PHGDH-213ENST00000641272 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
PHGDH-213ENST00000641272 RUNX1Q01196 453 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms