RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 TPBGQ13641 420 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 HMGN3Q15651 99 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 ETV3LQ6ZN32 361 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 TMEM91Q6ZNR0 172 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 PRSS48Q7RTY5 328 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 OR51D1Q8NGF3 324 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 GALMQ96C23 342 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 GFI1Q99684 422 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 YTHDF1Q9BYJ9 559 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 PLGRKTQ9HBL7 147 aa11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 CHMP1AQ9HD42 196 aaPredicted RBP11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 AK6Q9Y3D8 172 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-229ENST00000640440 RGS11O94810 467 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 CD37P11049 281 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 CPEP16870 476 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 MAP2K4P45985 399 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 OR3A3P47888 321 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 HTD2P86397 168 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 RAB11BQ15907 218 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 ODF3L1Q8IXM7 274 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 FAM71E2Q8N5Q1 922 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 OR2AK2Q8NG84 335 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 OR8H1Q8NGG4 311 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 SETD6Q8TBK2 473 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 IL1F10Q8WWZ1 152 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 RCC1LQ96I51 464 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 HSPB9Q9BQS6 159 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 ABRACLQ9P1F3 81 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 LRRC42Q9Y546 428 aa11.34□□□□□ -0.59
HNRNPU-229ENST00000640440 SLC17A2O00624 439 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 YPEL1O60688 119 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 MRPS14O60783 128 aaKnown RBP11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 ARL6IP5O75915 188 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 NAPSAO96009 420 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 SLC2A2P11168 524 aaPredicted RBP11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 ARSBP15848 533 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 PSMA1P25786 263 aaKnown RBP11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 THBS3P49746 956 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 FABP5Q01469 135 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 MMDQ15546 238 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 TRAM1Q15629 374 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 TEX38Q6PEX7 206 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 YPEL2Q96QA6 119 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 LPAR5Q9H1C0 372 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 ISYNA1Q9NPH2 558 aa11.33□□□□□ -0.6
HNRNPU-229ENST00000640440 SAA2-SAA4A0A096LPE2 208 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 ST8SIA5O15466 376 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 SOCS1O15524 211 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 SAA2P0DJI9 122 aaPredicted RBP11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 CALRP27797 417 aaKnown RBP11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 SOX6P35712 828 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 CLDN12P56749 244 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 PNLIPRP3Q17RR3 467 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 ZNF880Q6PDB4 577 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 ZNF833PQ6ZTB9 187 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 MGLLQ99685 303 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 NABP2Q9BQ15 211 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 HDHD3Q9BSH5 251 aaPredicted RBP11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 URM1Q9BTM9 101 aaKnown RBP11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 IFI27L2Q9H2X8 130 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 ZFP57Q9NU63 452 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 STEAP1Q9UHE8 339 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 AK3Q9UIJ7 227 aa11.32□□□□□ -0.6
HNRNPU-229ENST00000640440 TNCP24821 2201 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 DUS4LO95620 317 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 CNTFRP26992 372 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 ACTBP60709 375 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 TBCEQ15813 527 aaPredicted RBP11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 LY6G6FQ5SQ64 297 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 RITA1Q96K30 269 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 DUX3Q96PT4 197 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 GON7Q9BXV9 100 aa11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 ZNF107Q9UII5 783 aaPredicted RBP11.31□□□□□ -0.6
HNRNPU-229ENST00000640440 TRBV6-6A0A0A6YYG2 114 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 VDAC1P21796 283 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 SLC6A1P30531 599 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 FOXE3Q13461 319 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 FAM89BQ8N5H3 189 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 ARHGAP5-AS1Q96IT6 56 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 PARP12Q9H0J9 701 aaKnown RBP11.3□□□□□ -0.6
HNRNPU-229ENST00000640440 RIMS4Q9H426 269 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms